Ruegeria pomeroyi: SPO0050
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Entry
SPO0050 CDS
T00215
Name
(GenBank) ABC transporter, periplasmic substrate-binding protein
KO
K15598
putative hydroxymethylpyrimidine transport system substrate-binding protein
Organism
sil
Ruegeria pomeroyi
Pathway
sil02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SPO0050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPO0050
Transporters [BR:
sil02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative hydroxymethylpyrimidine transporter
SPO0050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMT1
NMT1_2
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
AAV93381
UniProt:
Q5LWK7
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All DBs
Position
50309..51349
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AA seq
346 aa
AA seq
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MPPASGPGALRNSCNRFGRARSFSLRPPHHERKRDMKHLVTALALLAATPALAQDKMTLL
LDWFINPDHGPIIVAQEKGYFAERGLEVEIVAPADPSAPPRLVAAGQADLAVSYQPQLHL
QIHEGLPLKRVGTLVATPLNCLLVLDNGPIKSPADLKGKKIGFSVAGVEEAILTTVLGKY
DVALSDVEMINVNFSLSPALMSGQVDAVIGAYRNFELNQMDIEGEPGRCFYIEEEGVPSY
DELIYVANPDRMDAGKIARFLEATEKATQFIVNNPQASWEIFSATSPELQDELNKRAWAD
TLPRFALRPAGFDAGRYARFETFLKDSGMIDSVNSVSAITIDVTAE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
gtgccaccggcctcagggcctggcgctctgcggaacagttgcaaccgatttggccgggcg
agatcgttctcgttgcggccgccacatcatgaaaggaaacgcgacatgaaacacctggta
accgcattggcgctgctggccgccacgcccgccctggcgcaggacaagatgaccctgctg
ctcgattggttcatcaaccctgaccacggcccgatcatcgtggcgcaggaaaagggatac
ttcgccgaacgcgggctggaggtcgagatcgtggcccccgccgacccctcggccccgccg
cgtctggtcgctgccggtcaggccgatctggcggtcagctatcagccgcaactgcacctg
caaatccacgaggggctgcccctgaaacgtgtcggcacgctggtcgccacccccctcaac
tgcctgctggtactggacaacggcccgatcaaatcgcccgccgacctcaagggcaagaag
atcggcttctctgttgcaggcgtcgaagaggcgatcctgaccacggttctgggtaaatac
gatgtcgcgctcagcgatgtcgagatgatcaacgtgaacttctcgctctcgcccgcgctg
atgagcggacaggtcgatgcggtgatcggcgcctatcgcaatttcgagttgaatcagatg
gatatcgagggcgagccgggtcgctgtttctatatcgaggaagaaggcgtgccgtcttat
gacgagctgatctatgtcgccaaccccgaccggatggatgccggcaagatcgcgcgcttc
cttgaggccaccgaaaaggcgacgcagttcatcgtcaacaacccgcaagcaagctgggaa
atcttctcggcgacttcgcccgaattgcaggacgaactgaacaagcgcgcctgggccgat
acgctgccgcgctttgcgctgcgtcctgctgggttcgacgcgggccgctatgcccggttc
gagacgtttctgaaggacagcgggatgatcgacagcgtgaactcagtctcggccatcacc
atcgacgtgaccgccgaatga
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