Ruegeria pomeroyi: SPO0247
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Entry
SPO0247 CDS
T00215
Symbol
dxs
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00730
Thiamine metabolism
sil00900
Terpenoid backbone biosynthesis
sil01100
Metabolic pathways
sil01110
Biosynthesis of secondary metabolites
Module
sil_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SPO0247 (dxs)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SPO0247 (dxs)
Enzymes [BR:
sil01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
SPO0247 (dxs)
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Paralog
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_N
E1_dh
Motif
Other DBs
NCBI-ProteinID:
AAV93567
UniProt:
Q5LX42
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All DBs
Position
complement(267660..269588)
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AA seq
642 aa
AA seq
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MSDRPHTPLLDQVTRPADLKRFSDAQLTQLAGELRAETVSAVSVTGGHLGAGLGVVELTV
ALHAVFDTPRDKVIWDVGHQCYPHKILTERRDRIRTLRMKDGLSGFTKRSESPYDPFGAA
HSSTSISAALGFAVARDLGGVTPEGLGDAIAVIGDGSMSAGMAFEAMNNAGHLKKRLIVI
LNDNEMSIAPPVGALSNYLSRLYAEEPFQELKAAAKGAVSLLPEPFREGAKRAKEMLKGM
AVGGTLFEELGFSYIGPIDGHDMGQLLPVLRTVKARATGPILLHVLTKKGKGYAPAERAR
DRGHATAKFDVVTGEQKKAPSNAPSYTAVFGKALVDQAARDDKIVAVTAAMPDGTGLNLF
AERYPSRCFDVGIAEQHGVTFSAALAAGGLKPFCAMYSTFLQRGYDQVVHDVAIQRLPVR
FAIDRAGLVGADGATHAGSFDIAYLANLPGMVVMAAADEAELVHMVATAAAHDDGPIAFR
YPRGEGVGVEMPELGKVLEIGKGRMIQKGARVALLSFGTRLTEVQKAAEALAARGITPTI
ADARFAKPLDRDLILNLAHDHEALITIEEGAVGGFGSHVAQLLADEGVFDHGLKFRSMVL
PDIFIDQSSPADMYAVAGMNAPQIEAKVLDVLGIGRIGEKRA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccgcccacataccccgcttctcgaccaggtgacccgcccggcggacctgaaa
cggttctcggacgcgcagctgacccagctggcgggcgagctgagggccgaaaccgtctcg
gccgtctcggtcaccggcggccatctgggcgcgggccttggcgtggtggaactgaccgtg
gcgctgcatgcggtgttcgacaccccgcgcgacaaggtgatctgggacgtcggccaccaa
tgctatccgcacaagatcctgaccgaacgccgcgaccgcatccgcaccctgcggatgaag
gacggtctgtcgggcttcaccaagcgctccgagtcgccctatgacccgttcggcgccgcc
catagctccacctcgatcagtgcagcactcgggttcgccgtcgcccgcgatctgggcggg
gtgacgcccgaagggttgggcgacgccatcgccgtgatcggcgacggctcgatgtcggcc
ggcatggcgtttgaggcgatgaacaacgcgggtcacctgaaaaagcgcctgatcgtcatc
ctgaacgacaacgagatgtcgatcgccccaccggtcggcgcgctgtcgaactatctctct
cgcctctatgccgaagaaccgtttcaggagctgaaagccgccgccaagggcgcggtctcg
ctcctgcccgaacccttccgcgaaggtgccaagcgcgccaaggaaatgctcaagggcatg
gccgtcggcggcacattgttcgaggagctgggtttttcctatatcggccccatcgacggg
catgacatgggccaacttctgccggtcctgcgcaccgtcaaggctcgcgccaccggcccg
atcctgctgcatgtgctgacgaaaaagggcaagggctatgcccctgccgaacgcgcgcgc
gaccgcggccatgccaccgccaaattcgacgtggtcacgggcgagcagaaaaaggccccc
tcgaacgcgccctcctacactgcggtctttggcaaggcgctggtcgatcaggccgcccgc
gacgacaagatcgtcgccgtcaccgccgcgatgcctgatggcaccgggctgaacctcttt
gccgaacgctacccctcgcgctgtttcgatgtgggcatcgccgaacagcatggcgtgacc
ttctccgccgcgctggctgcgggcgggctgaaacccttctgcgcgatgtattcgaccttc
ctgcaacgcggctacgatcaggtcgtgcatgacgtggcaatccagcgcctgccggtccgt
ttcgccatcgaccgcgccggtctggtcggcgccgacggcgccacccatgcgggcagtttc
gacattgcctacctcgccaacctgcccggcatggtggtcatggccgccgccgacgaggcc
gaactggtgcacatggtcgccaccgccgccgcgcatgatgacggtccgatcgccttccgc
tatccgcgcggcgagggcgtgggggtcgaaatgcccgaactgggcaaggttctggaaatc
ggcaagggccggatgatccagaagggcgctcgcgtcgcgctcctctccttcggcacccgg
ttgaccgaggtgcaaaaggccgccgaggcgctggccgcccgtggcattacccccaccatc
gccgacgcccgttttgcaaaaccgctcgaccgcgacctgatcctgaacctggctcacgac
cacgaggcgctgatcaccatcgaggaaggcgccgtgggcggcttcggcagccatgtggcg
cagcttctggcggatgagggcgtgttcgaccacgggctgaaattccgctctatggtgctg
ccggacatcttcatcgaccaatccagcccggccgacatgtatgccgttgcgggcatgaac
gccccccagatcgaagccaaagtgcttgatgtgcttggtatcgggcgtatcggcgaaaag
cgcgcctga
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