Ruegeria pomeroyi: SPO0278 Help Entry SPO0278           CDS       T00215                                  Symbol dapF Name (GenBank) diaminopimelate epimerase   KO K01778   diaminopimelate epimerase [EC:5.1.1.7] Organism sil  Ruegeria pomeroyi Pathway sil00300   Lysine biosynthesis sil00470   D-Amino acid metabolism sil01100   Metabolic pathways sil01110   Biosynthesis of secondary metabolites sil01120   Microbial metabolism in diverse environments sil01230   Biosynthesis of amino acids Module sil_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine Brite KEGG Orthology (KO) [BR:sil00001]  09100 Metabolism   09105 Amino acid metabolism    00300 Lysine biosynthesis     SPO0278 (dapF)   09106 Metabolism of other amino acids    00470 D-Amino acid metabolism     SPO0278 (dapF) Enzymes [BR:sil01000]  5. Isomerases   5.1  Racemases and epimerases    5.1.1  Acting on amino acids and derivatives     5.1.1.7  diaminopimelate epimerase      SPO0278 (dapF) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DAP_epimerase Motif Other DBs NCBI-ProteinID:  AAV93597 UniProt:  Q5LX66 LinkDB All DBs Position complement(293884..294693) Genome browser AA seq 269 aa AA seqDB search MTFMKMHGLGNDFVVVDARLHPVRITGALARGIAHRHLGVGFDQLAVIEPGKGDAHLVFY NADGSTSAACGNATRCIARHLMDETGKTELHLTTDRGDLYARDAGDGLTSVNMGAPQLLW HEIPLAEEMDTLELPIEGGPTATGMGNPHCTFFVADAEAIPLAEFGARYEHHPLYPQRTN LQVAQITGPDRIRMRVWERGVGITLASGSSSCATAVAAARRGLTGRKVQIDLDGGTIWID WREDGVWMTGPTMHVFSATLTPEFLASLG NT seq 810 nt NT seq  +upstreamnt  +downstreamnt atgaccttcatgaagatgcacgggctgggcaacgattttgtcgttgtcgatgcgcgcttg catccggtgcgcattaccggggcgctggcccggggaatcgcgcatcgccatctcggcgtg ggcttcgatcagctggcagtgatcgagccgggcaagggcgatgcccatctggtgttttac aatgccgacggttcgacctcggccgcctgtggcaatgccacccgctgtattgcacggcat ctgatggacgagaccggcaagaccgagttgcacctgaccaccgaccgtggcgatctatat gcgcgcgacgcgggcgatgggctaacctcggtcaacatgggcgcgccgcaacttttgtgg cacgagatcccgctggccgaagagatggatacgttggaactgccgatcgagggtggcccg accgccaccggcatgggcaacccgcattgcacctttttcgttgcggatgccgaggcgatt ccgctggcagagttcggtgcgcgctacgagcatcacccgctctatccgcagcgtaccaat ctgcaggtggcgcaaatcaccggccccgaccgtattcgcatgcgggtgtgggagcgtggc gtcggcatcaccctggcctccggctcctcttcctgcgccacggccgtggccgccgcacgc cggggcctgacggggcgcaaggtgcagatcgacctcgacggcggaaccatctggatcgac tggcgcgaggacggcgtctggatgaccggccccaccatgcatgtgttcagcgccacgctg acgcccgaattcctggccagcctgggatga

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