Ruegeria pomeroyi: SPO0346
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Entry
SPO0346 CDS
T00215
Symbol
sucD
Name
(GenBank) succinyl-CoA synthase, alpha subunit
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00020
Citrate cycle (TCA cycle)
sil00640
Propanoate metabolism
sil00660
C5-Branched dibasic acid metabolism
sil00720
Other carbon fixation pathways
sil01100
Metabolic pathways
sil01110
Biosynthesis of secondary metabolites
sil01120
Microbial metabolism in diverse environments
sil01200
Carbon metabolism
Module
sil_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sil_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SPO0346 (sucD)
00640 Propanoate metabolism
SPO0346 (sucD)
00660 C5-Branched dibasic acid metabolism
SPO0346 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
SPO0346 (sucD)
Enzymes [BR:
sil01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
SPO0346 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AAV93664
UniProt:
Q5LXC5
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All DBs
Position
complement(359481..360365)
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AA seq
294 aa
AA seq
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MAVLIDENTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGMEHLGLPVFNSVHEA
KHVTEANATVIYVPPPFAADSILEAIDAQMEVIVCITEGIPVLDMMKVKRALEGSSSRLI
GPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDIGLGQSTAVGIGG
DPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEEAAQFLKDEAKKGRKKPVAGFIAG
RTAPPGRRMGHAGAIVAGGKGGAEDKIEAMRSAGIVVADSPATLGEAVLEAIGK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcctcatcgacgaaaacaccaaagtgatctgtcagggctttaccggctcgcag
ggcacattccactctgaacaggccatcgcctatggcaccaagatggtcggcggtgtgact
cccggcaaaggcgggatggagcatctgggcctgcccgtgttcaactcggtccacgaagcc
aagcatgtgaccgaagccaatgccaccgtgatctatgtgccgccgcccttcgccgccgac
tcgatccttgaggcgatcgacgcccagatggaggtgatcgtctgcatcaccgaaggcatc
ccggttctggacatgatgaaggtcaagcgcgcgctcgaaggctcgtcctcgcgcctgatc
ggtcccaactgccccggcgtgatcacgcccgatgcctgcaagatcggcatcatgcccggc
catatccacaagcgcggcagcgttggcgttgtgtcccgctcgggcacgctgacctatgag
gcggtgaaacagacctcggatatcggtctgggccagtccaccgccgtgggcatcggcggc
gacccgatcaaggggaccgagcatatcgacgtgctggaatggttcctggccgacgatgaa
accgaaagcatcatcatgatcggtgaaatcggcggcagcgccgaggaagaagccgcccag
ttcctgaaggatgaggccaagaaaggccgcaagaagccggtcgccggtttcatcgcgggc
cgcaccgcccctccgggccgccgcatgggccacgcgggcgccatcgtcgccggcggcaag
ggcggcgccgaggacaagatcgaagccatgcgttcggctggcatcgtcgtggccgacagc
ccggcaaccctgggcgaggccgtgctggaagcgatcggcaagtaa
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