Ruegeria pomeroyi: SPO0364
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Entry
SPO0364 CDS
T00215
Name
(GenBank) decarboxylase, pyridoxal-dependent
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00330
Arginine and proline metabolism
sil00480
Glutathione metabolism
sil01100
Metabolic pathways
sil01110
Biosynthesis of secondary metabolites
sil04148
Efferocytosis
Module
sil_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SPO0364
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SPO0364
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SPO0364
Enzymes [BR:
sil01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
SPO0364
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AAV93682
UniProt:
Q5LXE4
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All DBs
Position
377206..378387
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AA seq
393 aa
AA seq
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MEMTLNAVVTGPLACESATLSRAETFILANRFDRPTLVIDTQAVARQFAALAQGLGRAGI
HYAVKANPLPEILSTLARLGSNFDAASRVEIELCLAAGASADRISFGNTVKKPADIAWAH
AAGIALFAADAEDELDKIAAHAPGAKVYIRMIVEACQADWPLSRKFGCAPDKAIAVLDYA
RSVGLDPVGLSFHVGSQTRRAEMWVPVLDQVAAVWHAARAAGHDLSLLNIGGGFPAFYGQ
EVDAPELYAAEVIRLVGERFGDVGQIMAEPGRGMVAEAGAIAAEVLLVSRKSGHDLHRWV
YLDIGKFSGLAETMDEAIRYQFLTEREHEPTGPCILAGPSCDSADVLYEKKPVQLPLGLR
DGDRIVIRNCGAYTSTYASVGFNGFPPLDVVAI
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
ttggagatgaccttgaacgcagttgtaaccgggcccttggcctgcgaaagcgcgactctg
tcccgcgccgaaacctttattctggccaatcgtttcgatcgccccacgctggtgattgac
acccaggccgtcgcccgccagttcgccgcgctggcgcaggggcttggccgcgcgggtatc
cactatgcggtcaaggcgaacccgctgccggaaatcctgtcgacgctggctcgcttgggc
agcaacttcgacgccgcctcgcgcgtcgagatcgagctgtgcctggccgcaggtgcctcg
gctgaccgtatttcctttggcaacacggtcaagaaaccggccgatatcgcctgggcgcat
gccgccgggatcgcgctatttgccgccgatgccgaagacgagttggacaagatcgcagcc
catgcaccgggcgcaaaggtctatatccgcatgatcgtcgaggcctgtcaggccgactgg
ccgctcagccgcaaattcggttgcgcgcctgacaaggccatcgctgtcctcgactatgcg
cgctctgtcggtctcgacccggttggcctgtcctttcatgtgggctcgcaaacccggcgc
gccgagatgtgggttccggttctggatcaggtggccgctgtctggcacgctgcccgcgca
gcagggcatgatctgagcctgctgaatatcggcggtggcttcccggccttctatggtcag
gaagtggatgcgcccgaactctacgccgccgaggtgatccgcctggtgggcgagcggttt
ggtgatgtggggcagatcatggccgagccgggccgcggcatggtggccgaggctggtgcg
atcgcggccgaggttctgctcgtctcgcgcaaatccggccatgacctgcaccgctgggtc
tatctggatatcggcaaattctcgggcctggccgaaaccatggacgaagcgatccgctat
cagtttctgaccgagcgtgagcatgagccgacaggcccctgcatcctggctggtccctcc
tgcgatagcgccgatgtgctttatgaaaagaaaccggttcagctgccgctgggtctgcgc
gatggcgaccggatcgtgatccgcaattgcggcgcctatacctcgacctatgccagcgtc
ggcttcaacggtttcccgccacttgacgttgtcgcgatctga
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