Ruegeria pomeroyi: SPO0446
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Entry
SPO0446 CDS
T00215
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K06020
energy-dependent translational throttle protein EttA
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sil03016
]
SPO0446
Transfer RNA biogenesis [BR:
sil03016
]
Prokaryotic type
tRNA transport factors
tRNA export factors
SPO0446
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_tran_Xtn
AAA_23
MMR_HSR1
AAA_29
SMC_N
RsgA_GTPase
AAA_22
AAA_15
Dynamin_N
AAA
NB-ARC
DLIC
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AAV93764
UniProt:
Q5LW96
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All DBs
Position
complement(456890..458545)
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AA seq
551 aa
AA seq
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MAAYQYVYHMQGVSKSYPGGKKCFENIHLSFLPGVKIGVVGVNGAGKSTLMKIMAGLDKD
FTGEAWAAEGAKVGYLPQEPHLDPNLTVRENVMLGVKAKKDILDRYNELAMNYSDETADE
MASLQDQIDAENLWDLDSQIDVSMEALRCPPDDANVESLSGGERRRVALCKLLLEAPDML
LLDEPTNHLDAETIAWLQQHLIDYKGTILIVTHDRYFLDSITGWILELDRGRGIPYEGNY
SAWLEQKAKRLEQEAREDKAKQKTLERELEWMRQGQKARQAKSKARIQAYNEMANQSERE
KVGRAQIVIPNGPRLGSKVIEVEGLSKHMGDKQLIEGLDFSLPPGGIVGVIGPNGAGKST
LFKMITGQEQPDAGSIEIGDTVKLSYVDQSRDDLKDGDTVWEAITGGAEIIQLGDAQVNS
RAYCSSFNFKGGDQQKKVSLLSGGERNRVHMARLLKEGGNVLLLDEPTNDLDVETLRALE
DALVDFAGCAVVISHDRFFLDRICTHILAFEGDAHVEWFEGNFEDYEEDKKRRLGPDALE
PKRLKHKKFVR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctatcaatatgtctaccacatgcagggtgtttccaagagctaccccggtggc
aagaaatgcttcgagaacattcacctgagcttcctgccgggggtcaagatcggcgtcgtc
ggcgtcaacggcgccggtaaatccactctgatgaagatcatggccggcctcgacaaggac
ttcaccggcgaggcctgggccgccgagggcgcaaaggtcggatacctcccgcaggaaccg
catctcgacccgaacctgaccgtgcgcgagaatgtcatgctgggggtcaaggccaagaag
gacatcctcgaccgctataacgagctggcgatgaactacagcgacgagaccgccgacgag
atggccagcctgcaagaccagatcgacgccgagaacctgtgggatctcgacagccagatc
gacgtctcgatggaagcgctgcgctgcccgcctgacgatgccaatgtggaaagcctctcg
ggcggggaacgccgccgggtggcgctgtgcaaactcctgctcgaagcgcccgacatgctg
ctgctcgacgaaccgaccaaccacctggacgccgaaaccatcgcctggctgcaacagcac
ctgatcgactacaagggcaccatcctgatcgtcacgcacgaccgctatttcctggacagc
atcaccggctggatcctggaactcgaccgcggccgcggcatcccttacgagggcaactat
tccgcttggctcgagcagaaggccaagcgcctggagcaggaagcgcgcgaggacaaggcc
aagcaaaagacgctggaacgcgaactggaatggatgcggcagggccaaaaggcgcgccag
gctaaatccaaggcccggatccaagcctataacgagatggccaaccagtccgaacgggaa
aaggtcggccgcgcccagatcgtcatccccaacggcccgcgcctgggctccaaggtgatc
gaggtcgagggcctttcgaaacacatgggcgacaagcagctgatcgagggcctcgacttc
tcgctgccccccggcggtatcgtcggcgtcatcggccccaacggcgccggtaaatcaacg
ctgttcaagatgatcaccgggcaggaacaacccgacgccggcagcatcgagatcggcgat
acggtcaagctctcctatgtcgatcagtcgcgcgacgatctgaaggatggcgataccgtg
tgggaggcgatcaccggcggcgccgagatcatccagctgggcgatgcccaggtgaacagc
cgcgcctattgctcgtccttcaacttcaagggcggcgaccagcagaagaaggtctcgctg
ctttcgggcggcgagcgcaaccgcgtgcacatggcgcggctcttgaaagagggcggcaac
gtcctcctgcttgacgaaccgaccaacgacctcgacgtcgaaaccctgcgcgcgctcgaa
gacgcgctggtcgatttcgccggctgcgccgtggtcatttcgcacgaccgcttcttcctc
gaccgcatctgcacccatatcctcgccttcgagggcgacgcccatgtggaatggttcgaa
ggcaacttcgaggattatgaagaggacaagaaacgccgcctgggccctgacgccctggaa
cccaagcggttgaagcacaagaagttcgtgcgatag
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