Ruegeria pomeroyi: SPO0653
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Entry
SPO0653 CDS
T00215
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase, B subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00230
Purine metabolism
sil01100
Metabolic pathways
sil01120
Microbial metabolism in diverse environments
sil01232
Nucleotide metabolism
Module
sil_M00958
Adenine ribonucleotide degradation, AMP => Urate
sil_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SPO0653 (xdhB)
Enzymes [BR:
sil01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
SPO0653 (xdhB)
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Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
AAV93961
UniProt:
Q5LVP7
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All DBs
Position
complement(674034..676364)
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AA seq
776 aa
AA seq
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MSVAKPLPHDAAPLHVAGTARYVDDIPTPRDTLHLAFGLSTIAKGRITAMDLDAVRKAPG
VVRVMVADDLPFANDVSPSAHDEPLLSDGTVHYVGQPLFVVVATSHLAARKAVRRARIDY
AEEPAILTIEQALAANSRFEDGPRIYEKGDAEAAISGAAHVIEGTFELGGQEHFYLEGQA
ALALPGEGGDMLVHSSTQHPTEIQHKVAEALGVPMHAVRVETRRMGGGFGGKESQGNALA
VACAVAARATGRACKMRYDRDDDMVITGKRHAFRIAYRAGFDAEGRIQGVSFLHHAICGW
AQDLSLPVADRAMLHADNAYLLPNARIESHRLKTNTQSATAYRGFGGPQGMVGIERVMDH
AAHVLGIDPVELRQRNYYAAPVGGAAPHIPRSISNQKEANTTPYGQVVEDFELHGMTEAL
LTSSDYAARKAAVAAWNAANPIVKRGIAFSPVKFGISFTLTHLNQAGALVHVYQDGSVHL
NHGGTEMGQGLFQKVAQVAASRFGIPLEMVKITATDTAKVPNTSATAASSGSDLNGMAVK
AACDTIRDRMAAYLAERHQAEVASVRFGNGHVEVGEARYSFAEAAALAYQGRISLSATGF
YKTPKIEWDRIQGRGRPFYYFAYGASVTEVAVDTLTGEYRILRADILHDAGASLNPDLDI
GQVEGGYVQGAGWLTTEELVWDDHGRLRTHAPSTYKIPACSDRPEVFNVALWDGQNREDT
IYRSKAVGEPPFMLGISAWLALSDAVASCGDAYPALNAPATAEEVWKGIRRLGDGV
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgccaaacccctgccccatgacgcggccccgctgcacgtggccggcaccgcc
cgctatgtcgacgatatccccaccccgcgcgatacgctgcatctggcctttggcctgagc
acgattgccaaggggcggatcaccgcgatggatctggacgcggtacggaaagcacccggc
gtggtccgggtgatggtggccgatgacctgccctttgccaatgatgtctcgccctcggcc
catgacgagccgctgttgtcggacggcaccgttcactacgtaggtcagccgctgttcgtg
gtggtggcgaccagccacctggccgcgcgcaaggcggtacggcgggcgcggatcgactat
gccgaggaacccgcgatcctgaccatcgaacaggcgctggcggccaacagccggttcgag
gacgggccgcgcatctatgaaaagggtgatgccgaggcggcgatttccggggcggctcat
gtcatcgagggcacattcgagctgggcgggcaggaacatttctatctcgaaggtcaggcc
gcgctggccttgcccggcgagggcggtgacatgctggtgcacagttccacccagcacccg
accgagattcagcacaaggtggccgaggcgcttggcgtgccgatgcacgccgtccgggtc
gagacccgccgcatgggcggcggtttcggaggcaaggagagccagggcaacgcgctggcg
gtggcctgcgccgtggcggcgcgcgccacggggcgtgcctgcaagatgcgctatgaccgc
gacgacgacatggtgatcaccggcaagcgccatgccttccgcatcgcctatcgcgccggg
ttcgacgcggaggggcggattcagggcgtctccttcttgcatcacgcgatctgcggctgg
gcgcaggacctgtcgctgccggtcgcggaccgggcgatgctgcatgcggacaatgcctat
ctgctgcccaatgcccggatcgagagccaccggctgaagaccaacacgcaatccgccacc
gcctatcgcgggttcggcgggccgcaggggatggtcgggatcgagcgggtgatggaccat
gccgcgcatgtgctggggatcgacccggtcgagttgaggcagcgtaattactatgcggcg
ccggtggggggcgctgccccccacatcccccggagtatttccaaccagaaagaagccaat
accacgccctatgggcaggtggtcgaggatttcgaactgcacgggatgaccgaagcgctg
ctgaccagttcggattacgccgcgcgcaaggcggcggtggcggcgtggaacgcggccaat
ccgatcgtcaagcgggggatcgcgttttcaccggtgaagttcgggatttcctttaccctg
acccatctgaaccaggcgggcgcgctggtgcatgtctatcaggatggctctgtacatttg
aatcatggcggcaccgagatgggccagggcctgttccagaaggtggcgcaggtggccgca
agccggttcggcattccgctggagatggtgaagatcaccgccaccgacaccgccaaggtg
cccaatacctcggccaccgcggcctcgtcgggatcggacctgaacggcatggcggtcaag
gccgcctgcgacaccatccgcgaccggatggcggcgtatctcgccgagcggcatcaggcg
gaggtcgcctcggtccggttcgggaatggtcatgtcgaggtgggcgaggcgcgctacagc
tttgccgaggcggcggcgctggcctatcaggggcggatcagcctgtcggcgaccgggttc
tacaagacgcccaagatcgagtgggaccgcatccaggggcgcgggcggccgttctactac
tttgcctatggcgcctcggtgaccgaggtggcggtggacacgctgaccggcgaataccgc
atcctgcgcgcggacatcctgcatgatgccggcgcctcgctgaaccccgatctggatatc
ggccaggtcgagggcggctacgtgcagggcgcgggctggctgaccaccgaggagctggtc
tgggacgatcacgggcggctcaggacgcatgcgccctcgacctacaagatcccggcctgt
tcggaccggcccgaggtgttcaacgtggcgctgtgggacgggcagaaccgcgaggacacg
atctatcggtcgaaggccgtgggcgagccgcccttcatgctggggatttcggcctggctg
gctttgtctgatgccgtggcatcctgtggcgatgcctatccggcgctgaacgcgcccgcg
acggcggaggaggtctggaaaggcatccggaggcttggcgatggcgtttga
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