Ruegeria pomeroyi: SPO0778
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Entry
SPO0778 CDS
T00215
Name
(GenBank) long-chain-fatty-acid--CoA ligase, putative
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00061
Fatty acid biosynthesis
sil00071
Fatty acid degradation
sil01100
Metabolic pathways
sil01212
Fatty acid metabolism
sil02024
Quorum sensing
sil04146
Peroxisome
Module
sil_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SPO0778
00071 Fatty acid degradation
SPO0778
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SPO0778
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPO0778
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sil01004
]
SPO0778
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sil04147
]
SPO0778
Enzymes [BR:
sil01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SPO0778
Lipid biosynthesis proteins [BR:
sil01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SPO0778
Exosome [BR:
sil04147
]
Exosomal proteins
Exosomal proteins of breast milk
SPO0778
Exosomal proteins of breast cancer cells
SPO0778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AAV94083
UniProt:
Q5LVC4
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All DBs
Position
810705..812195
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AA seq
496 aa
AA seq
DB search
MEKWHDYPGAQIASRPDAPAFSDSGGADWSYGDLDRAISALVDVLSAKGVHANDRVMILA
ENCCAVVAALFAASRLGACAVPINARQTGPEVNKIIAHTEPAAILCASDISADAAAHAPR
LDAQLVEGAFGRMHLATPHPSKPDPVLSDVAVMLFTTGTTGTPKGVMLTHGNLLFGGRSS
AELRGMTTDDVIYGVLPVTHVFGLASVVTAATCIGAPVRLDARFTAARSYAALTSGVTLF
SAVPQMHALLMQHAREQGYDHLPGGTLRYTSSGAAPLDPAWKRKAEAFYGVALQNGYGLT
ETTAGVSATRNPIGLPDISVGRPLPQVEVRLDEAVIGGGDGVGEVLTRGPHVMKGYYRNP
QATEAALHDGWFRTGDLGRHDAEGNLHIAGRCKELIIHGGFNVYPPEVEAALNDHPQVIQ
SAVVGRMIEGDEKVVAFVQVAPADAPDPDELRAFAAARLAGYKRPSQIVLATALPAAPTG
KILKHKLLDHFADQLD
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatggcacgactaccccggcgcacagatcgccagccgccccgatgcgcccgcg
ttttccgacagtggcggcgcggactggagctatggcgatctggaccgcgccatttcggcg
ctggtggacgtgctctcggcaaagggcgtgcacgccaacgaccgggtgatgatcctggcc
gagaattgctgtgcggtggtggccgcgctctttgccgcttcgcggctgggtgcctgcgcg
gtaccgatcaacgcgcgccagaccgggcccgaggtgaacaagatcatcgcccataccgaa
cccgccgcgatcctttgcgcctcggacatttcggcggatgccgccgcccatgccccgcgt
ctggacgcgcagctggtcgagggcgcctttggccggatgcatctggcgacaccccacccc
agcaagcccgatccggtgctgagcgatgtggcggtgatgctgttcaccaccggcaccacc
ggcacgcccaagggggtgatgctgacccatggcaatctgctgtttggcgggcgcagctcg
gcagagctgcgcggcatgacaacggatgacgtgatttatggcgtgctgccggtgacccat
gtgtttggcctcgcctcggtggtgacggcggccacctgtatcggtgctccggtacggctc
gatgcgcggttcaccgctgcgcgcagctacgcggcgctgacctcgggggtgacgctgttt
tccgccgtgccgcagatgcatgcgctgttgatgcaacatgcgcgtgaacaggggtatgac
cacctgccgggtggcacgctgcgctatacctcctcgggcgcggccccgctcgaccccgca
tggaagcgcaaggccgaggcgttttatggcgttgccctgcaaaacgggtatggcctgacc
gagaccaccgccggtgtctcggccacgcgcaatccgatcggtctgccggatatctcggtc
ggccgccccctgccgcaggtcgaggtacggctggacgaggcggtcatcggcggcggcgat
ggcgtgggcgaggtgctcacccgcggcccccatgtgatgaagggctattaccgcaacccg
caggcgaccgaggccgcgctgcacgacggctggttccgcaccggcgatctgggccgccat
gatgccgagggcaacctgcatatcgccgggcgctgcaaggagctgatcattcacggaggt
ttcaacgtctacccgcccgaggtcgaggccgcgctgaacgatcacccgcaggtgatccag
tcggcggtggtcgggcgcatgatagagggtgacgaaaaggtggtcgcctttgttcaggtc
gcgcccgcagatgcgcccgaccctgacgagctgcgagctttcgccgccgcgcgccttgcc
ggttacaagcgccccagccagatcgtgcttgccacggcgctgcccgccgcgcccaccggc
aagatcctcaaacacaagctgctcgaccatttcgccgatcaactcgattga
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