Ruegeria pomeroyi: SPO0808
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Entry
SPO0808 CDS
T00215
Symbol
trpB
Name
(GenBank) tryptophan synthase, beta subunit
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00260
Glycine, serine and threonine metabolism
sil00400
Phenylalanine, tyrosine and tryptophan biosynthesis
sil01100
Metabolic pathways
sil01110
Biosynthesis of secondary metabolites
sil01230
Biosynthesis of amino acids
Module
sil_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SPO0808 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
SPO0808 (trpB)
Enzymes [BR:
sil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
SPO0808 (trpB)
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Ortholog
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GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
AAV94113
UniProt:
Q5LV94
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All DBs
Position
841824..843074
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AA seq
416 aa
AA seq
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MANDLFNSFMSGPDEQGRFGIFGGRFVSETLMPLILSLEEEYEKAKTDPSFWAEMDDLWT
NYVGRPSPLYFAERLTEHLGGAKVYMKRDELNHTGAHKINNVLGQIILARRMGKTRIIAE
TGAGQHGVATATVCAKFGLKCVVYMGAHDVRRQAPNVFRMRLLGAEVIPVTSGRGTLKDA
MNDALRDWVTNVRDTFYCIGTVAGPHPYPAMVRDFQSIIGKEAKEQMMKAEGRLPDTIIA
AIGGGSNAMGLFYPFLDDTSVNIIGVEAGGKGVNEKMEHCASLTGGRPGVLHGNRTYLLQ
DDDGQILEGYSISAGLDYPGIGPEHSWLHEVGRAKYVSITDMEALEAFKLCCATEGIIPA
LEPSHALAHVMKLAPELPKDHIIIMNMCGRGDKDIFTVAKFLGFDMSDTEGRDAED
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgaccttttcaattccttcatgtccgggcctgacgaacagggccggttcggg
attttcggaggacgcttcgtcagtgaaacgctgatgccgctgatcctgtcgttggaagag
gaatatgagaaggccaagaccgacccgagtttctgggcggagatggacgatctttggacc
aattatgtgggccgaccctcgccgctctatttcgccgagcggctgaccgagcatctgggc
ggcgccaaggtctatatgaagcgcgacgaattgaaccataccggcgcacacaagatcaac
aacgtgctgggccagatcatcctggcgcgccgcatgggcaagacccggatcatcgccgaa
accggtgctggacagcatggtgtggcgaccgcgacggtctgcgccaagttcggcctgaaa
tgcgtggtctatatgggggcccatgacgtgcgccgccaggcgcccaacgtgttccgcatg
cgtttgttgggggccgaagtgatcccggtcacctcgggccggggcacgctcaaggacgcg
atgaacgacgcgctgcgcgactgggtgaccaatgtgcgcgacacgttctactgcatcggc
acggttgctggcccgcacccctatccggcgatggtgcgcgatttccagtcgatcatcggc
aaggaagccaaggaacagatgatgaaggccgaaggccgtctgcccgacaccatcatcgcc
gccatcggcggtggctctaacgcgatgggcctgttctaccccttcctcgacgatacaagc
gtcaacatcatcggggtcgaggccggcggcaagggcgtcaacgagaagatggaacattgc
gcctcgctgaccggcgggcgtccgggcgttctgcatggtaaccggacctatctgctgcag
gacgacgatggccagatcctcgaaggctattcgatctcggcgggcctcgactatccgggc
atcgggccggaacattcctggctgcatgaggtcgggcgcgccaaatacgtgtcgatcacc
gatatggaggcgctggaagcgttcaagctctgctgtgccaccgaggggatcatcccagcg
ctcgaacccagccacgcgctggcccatgtgatgaaactcgcaccagagctgcccaaggat
cacatcatcatcatgaacatgtgcggccggggcgacaaggacatctttacggtggccaag
ttcctgggatttgacatgtccgataccgaggggcgcgacgccgaggattga
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