Ruegeria pomeroyi: SPO0861
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Entry
SPO0861 CDS
T00215
Symbol
xylF
Name
(GenBank) xylose ABC transporter, periplasmic xylose-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
sil
Ruegeria pomeroyi
Pathway
sil02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SPO0861 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPO0861 (xylF)
Transporters [BR:
sil02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
SPO0861 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_3
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
AAV94166
UniProt:
Q5LV41
LinkDB
All DBs
Position
912911..913939
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AA seq
342 aa
AA seq
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MKLFATAAAVIAGAVMSTSALAQDVVVGVSWSNFQEERWKTDEAAIKAELESKGAKYISA
DAQSSSAKQLSDVESLIAQGATALIILAQDAQAIGPAVQAAADEGIPVVGYDRLIEDSRA
FYLTFDNVEVGRMQARAVLEAAPSGRYVMIKGSPTDPNADFLRGGQQEVLQAAIDKGDIT
IVGEAYTDGWLPANAQRNMEQILTATDNGVDAVVASNDGTAGGVVAALTAQGMEGLPVSG
QDGDHAALNRVAKGTQTVSVWKDARDLGRAAARIAVSLAEGTQMNAIGGADDWTSPGGTK
MNAMFLEPLPITKDNLSVVVDAGWITQETLCQGVTNGPAPCN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctttgcaaccgcggctgcggtgattgcgggtgccgtgatgagcacctcggcc
ctggcccaggatgtcgttgtcggcgtcagctggtcgaactttcaggaagagcgctggaaa
accgacgaggccgcgatcaaggccgagctggaatccaagggcgccaagtatatttccgcc
gatgcccaaagctcctcggccaagcagctgtcggatgtggaaagcctgatcgcgcaaggc
gcgaccgcgctgattatcctggcacaggacgcgcaggccatcggccccgccgtgcaggcc
gcagcagacgaggggatcccggtcgtcggttatgaccgcctgatcgaggacagccgcgca
ttttacctgaccttcgacaacgtcgaagtgggccggatgcaggcccgcgcggtgctcgag
gccgcgccctccgggcgctatgtcatgatcaagggctcgcccaccgatccgaacgccgat
ttcctacgcggcggtcagcaggaagtgctgcaagccgccatcgacaagggggacattacc
atcgtcggcgaggcctataccgacggctggctgcccgccaacgcgcagcgcaacatggaa
cagatcctgaccgccacagacaacggtgtggacgcggttgtcgcctcgaacgacggcacc
gccggcggcgttgtggcggcgctgaccgcgcaagggatggaaggcttgccggtctcgggc
caggatggcgaccatgccgcgctgaaccgggtggccaagggcacccagaccgtttcggtc
tggaaggacgctcgcgatctgggccgtgcggctgcgcgtatcgccgtgtcgctggccgaa
ggcacccagatgaacgccatcggcggcgccgatgactggacctcgccgggtggcaccaag
atgaacgccatgtttctcgagccgctgccgatcaccaaagacaacctgtcggttgttgtc
gacgctggctggatcacccaggaaaccctgtgccagggcgtgaccaacggtcccgcaccc
tgcaactga
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