Ruegeria pomeroyi: SPO0867
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Entry
SPO0867 CDS
T00215
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPO0867
Transporters [BR:
sil02000
]
Other transporters
Pores ion channels [TC:
1
]
SPO0867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
AAV94172
UniProt:
Q5LV35
LinkDB
All DBs
Position
complement(919832..923914)
Genome browser
AA seq
1360 aa
AA seq
DB search
MKPVVYPLAFALTLSSAVAQTQSLEESGGLLVDFLEDTLSGEGRNIRVRGLSGALSARAT
IEEITVADADGVWLTIRAAELDWNRLALLRGRFSVNTLTAAEIDIARAPLPAPAELELPD
AAATPFQVPELPVAVELGELGVETLTLGAPLLGVAATLSIGGNLTLADGALDTTLSVTRL
DRPGDKVDLVAGFANETRQITLDLTLTEAAGGLIATTLAIPDAPALMLSAKGAGPVDDFT
ADIGLSSDAVERVSGQVRLRGTGDDTAPGIAFAADLGGDVTPLLDAAFDPFFGADTRLGI
EGVSLADGALRLDRFDLRSDALDLSGALALAAGGALERAVLDGRITPPDGTRVTLPVPDQ
RITLGAARLAGRYDRAQGDGWSLNLSAEALDTPDLRLDLARIDASGTLTPGAGGPTLAGR
IEAALSGMGFADPALNSALGTALTLEGGFELPPERDLSLSGLTLRGADFTATADAVIDGL
TSGFEMDGTVSLTATDLSHFSGLAGRDLGGVAQARLTGTGAPLSGSFDFVLDVDGRDLKT
GMAEADPLLTGNSRLHLDALRDDTGMTVRKLTLDAAAGRITAQARVTQPGGELALDGSLR
IDTPDLAPFSALAGRPLSGGAVADITGNVARLGEEFDLSIDLSGQNLSSGMAEIDPLLAG
ASRIGLDARRAGNSLTLRRFTLDAPVLTAQVQGEVTGLTTEAVFDGTARIEAPDLAPFSA
LAGLELGGRIRAGLEGRSALNGERFDLSLALDATDLRTGIAQADALIAGQTRLEFDGSRD
AGGMDIRHFDLDGSALSAEASGAFRGTGSNLRFAARLDELSRVTPSVSGPLQLSGTLSPT
ATGLRSEVELLGPDSSFARLNGTVDTDGAADLAFDAELARLERFVPDLAGALKAVGTATR
ASGIWTVAGNARGPAGITADVAGTFDEAKGAADMTATGQLSLGAANKALAPNKIEGTARF
DLALRGTPGLGALSGTITTAESALAIPDLGQTITGIGGTVTLADSAARIDIRGGVRAGGG
FTVSGPVSLLPPFDGQIAVRLNDLVLTDNLSYDSRLGGQITLSGPLTGNSRLAGQIEVGE
TNINLNTASGAVGAAPIPEGMVHQREPAAVRATRQRAKLIDSGNGNGGRTSMALDIAINA
PGKVYARGRGLNAEMGGRIHIGGTSAAVVPSGQIGLIRGDFNILGRRLKLTKGVVTLQGD
LTPYVEFASTATTSEGQATLRIIGPLDQPEVRVTADPDRPSEEALAMLLFGNQFSQLSPF
VIAQMAASLATLSGHGGDVAKGARDKTGADTVEIGTDAGGVGRLGAGAYLSDNLYTDFTV
NIEGDTEVNLNLDVTDNLTLKGMVDNAGDTSLGIFFERDY
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccggttgtatatccgctggccttcgcgctcaccctgtcctcggccgtggcccag
acccagagcctggaggaaagcggcggtctgctggtcgattttcttgaggacaccctttcg
ggcgaggggcgcaatatccgggtgcgcggtctctcgggcgcgctcagcgcgcgcgccacc
atcgaggaaatcaccgtcgccgacgctgacggggtctggctgaccatccgcgcggcggaa
ctggattggaaccggctggcgctgctgcgcgggcggttctcggtcaacacgctgaccgcc
gccgaaatcgacattgcccgcgcgcccctgcccgcgcccgccgagctcgaactgcccgat
gccgccgcgaccccgttccaggtgcccgaattgcccgtcgccgtggaactgggagagctt
ggggtcgagacactgacgctgggcgcgccgctgctgggcgtggcggcgacactgtcgatc
gggggtaacctgaccctggccgacggggcgcttgacaccacgctgagcgtgacccggctg
gaccggcccggcgacaaggtcgatctggtggcgggttttgccaacgagacccggcagatc
accctggacctgaccctgaccgaggcggctggcggtctgatcgcgaccacgctggccatc
cccgacgcccccgcactgatgctcagcgccaagggcgccgggccggtcgacgatttcacc
gcagatatcgggctgagcagcgacgcggtcgagcgggtcagcgggcaggtgcgcctgcgc
ggcaccggcgatgacaccgcccccggcatcgcctttgccgccgacctgggcggcgatgtc
acgccgctgcttgatgccgcgttcgacccgttcttcggcgccgatacccggcttgggatc
gagggggtgtcgctggcggacggggcgctgaggcttgaccggttcgacctgcgttccgac
gcgctcgacctcagcggcgcgctggcgctggcggcgggcggcgcgctggaacgcgcggtg
ctcgatgggcggatcaccccgcccgatggcacccgtgtcaccctgcccgtgcccgatcag
cgcatcacgctgggcgcggcacgactggcaggccgctatgaccgggcccagggcgatggc
tggtctctgaacctgagcgccgaggcgcttgacacgcccgatctgcggctcgaccttgcc
cggatcgacgccagcggcaccctgacaccgggcgcgggtggccccaccctggcgggccgt
atcgaggcggcgctgagcgggatgggctttgccgacccggcgctgaacagcgcgctgggc
accgcgctgacgctggagggcgggttcgagctgccccccgaacgggatctgtcgctgagc
ggcctcaccctgcgcggcgcggatttcaccgcgaccgcagatgctgtgatcgacgggctg
acctcgggctttgaaatggacggaacggtcagcctgaccgccaccgatctcagccacttc
tcggggcttgcgggccgcgatctgggcggcgtcgcccaggcacgactgaccggcaccggc
gcgcccctgtcgggcagcttcgactttgtgctggatgttgacggccgcgacctgaaaacc
ggcatggccgaggccgacccgctgctgaccggcaacagccgcctccatctggacgcgctg
cgcgatgataccgggatgacggtgcgcaagctgacactggacgcagccgcgggccggatc
acggcccaggcccgggtcacccaaccgggcggcgagctggcgctggatggcagcctgcgg
atcgacacgccggatctggccccgttctcggcgctggccgggcgtccgctgagcgggggc
gcggtggctgacatcaccggcaatgtcgcccggctgggcgaggaattcgacctgagtatc
gacctgagcggccagaacctgtcgagcggcatggccgagatcgacccgctgttggccggg
gccagccggatcgggctggatgcccgccgggcgggcaacagcctgaccctgcgccgcttc
actctcgacgcgccggtgctgacggcgcaggtgcagggcgaggtgaccgggttgaccacg
gaagcggtctttgacggcaccgcgcggatcgaagcgcccgatctggccccgttctcggcg
ctggccgggttggaacttggcggacggatccgtgccgggctggaggggcgctcggcgctg
aacggcgagcgcttcgacctcagcctggcgcttgatgccaccgacctgcgcaccggcatc
gcccaggccgacgccctgatcgccgggcagacccggctggaattcgacggcagccgcgat
gcgggcggcatggatatccgccatttcgacctggacggcagcgcgctcagcgccgaggcc
tcgggcgcctttcgcggtaccggcagcaacctgcgtttcgccgcccgtctggacgagctg
tcgcgggtgacgccctctgtctcggggccgctgcaactgagcgggaccttgtcgcccacc
gcaaccggcctgcgcagcgaggtggaattgctggggcctgacagttcctttgcccggctg
aacggcaccgtcgataccgatggcgccgccgatctggcgtttgacgccgaactggcgcgg
cttgaacggttcgtgcccgatctggccggggcgctcaaggctgtcggaaccgccacccgc
gcaagcggcatctggaccgtcgccggcaacgcccggggccccgccggaatcacggcggat
gtggccggcacctttgacgaggcaaagggcgcggcggacatgacggcaacgggccagctg
agcctgggcgcagccaacaaggcgctggcccccaacaagatcgaaggcaccgcccggttc
gatctggcgctgcgcggcacaccggggctgggcgcgctcagcggcaccatcaccacggca
gagtcggcgctggcgatccccgatctgggccaaaccatcaccggcatcggcggcaccgtc
acccttgccgacagcgccgcccggatcgacatccgtggtggcgtccgcgccggcggcggc
tttaccgtcagcggcccggtctcgctgctgcccccctttgacgggcagatcgcggtgcgg
ctgaacgacctggtgttgaccgacaacctttcctatgacagccggttgggcgggcagatc
accctgtccgggccgctgacgggcaacagcaggctggccgggcagatcgaggtgggcgag
accaatatcaacctcaacaccgcctcgggcgcggttggcgcggccccgatccccgaaggc
atggtacatcagcgcgaaccggctgcggtgcgtgccacccggcagcgcgccaagctgatc
gatagcggcaatggcaatggcgggcgcaccagcatggcactggacatcgcgatcaacgcc
ccgggcaaggtctatgcgcgcgggcgcggcctgaatgccgagatgggcggacgcatccat
atcggcggcaccagcgcggccgtggttccctcgggccagatcgggctgatccggggcgat
ttcaacatcctcggcagacggttgaaactgaccaagggcgtcgtcaccctgcagggcgat
cttaccccctatgtcgagttcgcctcgaccgccaccacctcggaagggcaggccacgctc
aggatcatcgggccgctggaccagcccgaggtccgggtgaccgcggaccccgaccgcccc
tccgaagaggcgctggcgatgctgctgttcggcaaccagttctcgcagctctcgcccttt
gtgatcgcgcagatggccgcctcgctggcgacattgtcgggccatggcggtgacgtcgcc
aaaggggcaagggataagaccggcgccgacacggtcgaaatcggtacggacgcgggcggg
gttggacggctgggtgccggggcctatctgagtgacaatctctacaccgatttcaccgtc
aatatcgaaggcgacaccgaggtgaacctgaacctggacgtgaccgacaatctgacgctc
aagggtatggtcgacaatgctggcgacacctcgctgggcatcttcttcgagcgcgattac
tga
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