Ruegeria pomeroyi: SPO0944
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Entry
SPO0944 CDS
T00215
Name
(GenBank) RNA modification enzyme, MiaB-family
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sil03009
]
SPO0944
Enzymes [BR:
sil01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SPO0944
Ribosome biogenesis [BR:
sil03009
]
Prokaryotic type
ribosomal protein modification factors
SPO0944
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AAV94249
UniProt:
Q5LUV8
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All DBs
Position
complement(993167..994567)
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AA seq
466 aa
AA seq
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MRAMSTNPPNLRPDLAPAARLGTAATRPGQPTIGMVSLGCPKALVDSERILTRLRAEGYG
ISPDYAGADAVIVNTCGFLDSAKAESLDAIGEALKENGKVIVTGCLGAEPDYIREHHPRI
LAVTGPHQYEQVLDAVHGAVPPDPDPFVDLLPASGVQLTPRHYSYLKISEGCNHKCKFCI
IPDMRGKLASRPAHAVLREAEKLVDNGVKELLIISQDTSAYGLDRKYDTNLWKNREVRSH
ITDLARELGQLDAWVRLHYVYPYPHVRELIPLMADAGCNLLPYLDIPFQHAHPDTLKRMA
RPAAAARTLDEIAAWREICPEITLRSTFIVGYPGETEAEFQTLLDWMDEAQLDRVGCFQY
ENVAGARSNDLPDHVPAEVKQERWDRFMAKAQAISEAKLAARVGQVIEVIVDEVDDEAAT
CRTKSDAPEIDGNLFIDEGFEGLQPGDIVTVEVDEAGEYDLWGRLR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccatgagcacgaaccctccgaacctgcgccccgacctggcccccgccgcccga
ctgggcaccgccgccacccgccccggccagccgaccatcggcatggtctcgctgggctgt
cccaaggcgctggtcgacagcgagcgcatcctgacccggctcagggccgagggctatggc
atttcgcccgactatgcgggcgccgatgcggtgatcgtcaacacctgcggttttcttgat
agtgccaaggccgagagcctggatgcgatcggcgaggcgctcaaggaaaacggcaaggtg
atcgtgaccggctgcctgggcgccgaacccgactatatccgcgagcatcatccgcgcatt
ctggccgtcaccggcccgcatcaatacgagcaggttctggatgccgtgcatggcgcggtg
ccgcccgatccggacccgtttgtcgacctgctgcccgcctcgggcgttcagctgacgccg
cgccattacagttacctcaagatttccgagggctgtaaccacaagtgcaagttctgcatc
atccccgacatgcgtggcaagctggccagccgccccgcccatgcggtgctgcgcgaagcg
gaaaagcttgtggataacggtgtgaaagagctcctgatcatctctcaggatacaagtgct
tacgggttggatcgcaagtatgacacgaacctgtggaaaaaccgcgaggtccgcagccat
atcaccgatctggcccgcgagttgggacagctcgatgcctgggtacggctgcattacgtc
tatccctatccgcatgtgcgcgagctgatcccgctgatggcagatgcggggtgcaacctg
ttgccctatctggatattcccttccagcatgcacatcccgacacgctgaagcgcatggcg
cgcccggcagcggcggcgcgcaccctggacgagatcgccgcctggcgcgagatctgtccc
gagatcaccctgcgctcgaccttcatcgtcggctatcccggcgagaccgaggccgagttc
cagaccctgctcgactggatggacgaggcgcagctggatcgcgtcggctgcttccaatac
gaaaacgtggcgggtgcccgctcgaacgacctgcccgatcatgttccggcagaagtcaag
caagagcgctgggaccggttcatggcaaaggcgcaggcgatttccgaggcgaaactggcc
gcgcgggtgggacaggtgatcgaggtgatcgtcgacgaggtcgacgacgaggccgccacc
tgccgcaccaagtcggacgcccccgagatcgacggcaacctgttcatcgacgagggattc
gaaggcttgcagcccggcgatatcgtgacggtcgaagtggacgaggccggggaatatgat
ctgtggggacgtctaagatag
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