Ruegeria pomeroyi: SPO1021
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Entry
SPO1021 CDS
T00215
Name
(GenBank) branched-chain amino acid ABC transporter, periplasmic substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
sil
Ruegeria pomeroyi
Pathway
sil02010
ABC transporters
sil02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SPO1021
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPO1021
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPO1021
Transporters [BR:
sil02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
SPO1021
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
AAV94325
UniProt:
Q5LUN2
LinkDB
All DBs
Position
complement(1070920..1072272)
Genome browser
AA seq
450 aa
AA seq
DB search
MSKNQVTRRGVLKTGAVAGAGVALPTIFTASSAAAYTNEPTGGTVTLGFNVPQTGPYADE
GNDELLAQQLAVEHLNGMGDGGCLNTFTSKALKGNGILGKKVQFVTGDTQTKSDAARASA
KSMIEKDGAIMINGGSSSGVAVAVQGLCQDAGVIFMAGLTHANDTTGKDRKANGFRHFFN
AYMSGAALAPVLAKEMGSDRRAYHLTADYNWGWTQEESIVASTEALGWETVNTVKTPLAS
TDFSSYIAPVLNSGADVLVLNHYGGNMVNSLTNAIQFGLLDKVANGKDFKIVVPLYSELM
AAGAGDNIKGVLGSMNYNWQLDNEGSRAFVKSFGEKYGKPPSNSAQTCYAQVLLYADACE
RAGTFNPCGVVEALEGFEFDGLGNGKTLYRADDHQCFKDVLVVRGAQNPTNAYDTLEIVE
VTPVAQVMYPPNHPMFGGDEATLGQCNPGA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaaccaagtcacgcgccggggcgtgctcaaaaccggtgcggttgccggggcc
ggtgtggccctgccgacgatcttcaccgcctcttcggccgccgcctataccaacgaaccc
accggtggcaccgtcaccctgggtttcaacgtgccccagaccggcccctatgcggatgaa
ggcaatgacgaattgctggcgcagcagctggcggtcgagcatctgaacgggatgggcgac
ggcggctgcctgaacacattcacctcgaaggcgctcaaggggaacggcatcctgggcaag
aaggtccagttcgtgaccggcgacacccagaccaagtcggacgccgcccgcgcatcggcc
aagtcgatgatcgaaaaggacggcgccatcatgatcaacggcggctcgtcctcgggcgtg
gctgttgccgtgcagggcctgtgccaggatgcgggcgtgatcttcatggccggcctgacc
catgccaacgacaccaccggcaaggaccgcaaggccaatggcttccgtcatttcttcaac
gcctacatgtcgggtgccgcgctggcgccggtgctggccaaggagatgggctcggatcgg
cgcgcctatcacctgaccgccgactacaactggggctggacccaggaagagtcgatcgtg
gcctcgaccgaggcgctgggctgggaaaccgtgaacacggtcaagaccccgctcgcctcg
accgatttctcgtcctacatcgcgccggtcctgaactcgggcgccgacgtgctggttctg
aaccactatggcggcaacatggtcaactcgctgaccaacgccatccagttcggcctgctg
gacaaggtcgccaacggcaaggacttcaagatcgtcgtgccgctctattcggaactgatg
gccgccggtgccggcgacaacatcaagggcgtgctgggctcgatgaactacaactggcag
ctcgacaacgagggctcgcgcgccttcgtcaagtcgttcggcgagaaatacggcaaaccg
ccgtcgaactcggcccagacctgctatgcgcaggttctgctttatgccgatgcctgcgaa
cgggcaggaaccttcaacccctgcggtgtggtcgaagcgctggaaggcttcgaattcgac
ggtctgggcaacggcaagacgctctatcgcgccgatgaccaccagtgcttcaaggacgtt
ctggtcgtgcgcggtgcgcagaacccgaccaacgcctatgacacgctggaaatcgtcgag
gtcaccccggtcgcgcaggtcatgtatccgccgaaccacccgatgttcggtggcgacgag
gccacgctgggccagtgcaacccgggcgcctga
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