Ruegeria pomeroyi: SPO1078
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Entry
SPO1078 CDS
T00215
Name
(GenBank) transcriptional regulator, LysR family
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sil03000
]
SPO1078
03036 Chromosome and associated proteins [BR:
sil03036
]
SPO1078
Transcription factors [BR:
sil03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SPO1078
Chromosome and associated proteins [BR:
sil03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
SPO1078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
P22_Cro
HTH_30
HTH_AsnC-type
TetR_C_11
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AAV94378
UniProt:
Q5LUH6
LinkDB
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Position
complement(1134437..1135321)
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AA seq
294 aa
AA seq
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MQFDPQQLAALAAILRLGSFEAAAGALSVTPSAVSQRIRALEEKVGLALIQRGPPATGTA
AGLRLARHAEDVGLLEAQVSRDLALDQGAGPVRVRIAVNADSLATWFLEAMTGVEDVLFD
LVIDDQDHSADWLRRGEVAAAITAHGKPVPGCDAHPLGALRYIATASPGFMQDWFAEGVT
ATALARAPCLTFSPKDRLQKAWIAAHVAEALTPPTHFLPSTHAFVDAALAGVGWGMNPES
LIRQHVAQGNLHPLLPQAPLDVPLTWQVSRVLTPALAPLTRAVRRAASRGLIAG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcgacccgcaacagcttgccgcgctggccgccatcctgagactgggcagtttc
gaggccgccgccggggcgctctcggtcaccccgtcggcggtgtcccagcgcatccgcgcg
ctggaagagaaggtgggcctggcgctgatccagcgcggcccgccggcaacgggcaccgcc
gccggtctgcggctggcgcgccatgccgaggatgtgggcctgctggaggcgcaggtgagc
cgcgatctggcgctggaccagggtgccgggccggtacgggtgcggatcgctgtcaatgcc
gacagccttgccacctggtttctggaggcgatgaccggggtcgaagatgtgctgttcgat
ctggtgatcgacgatcaggaccattccgccgactggctcaggcgcggtgaggtcgccgcc
gcgatcaccgcccatggcaagccggtgcccggctgcgacgcgcacccgctgggcgcgctg
cgctatatcgcgaccgccagccccggcttcatgcaagactggttcgccgaaggggtcacc
gcgacggcgctggcgcgcgcgccctgcctgaccttcagtcccaaggaccggctgcaaaaa
gcctggatcgccgcgcatgtcgccgaggctctgacaccgcccacccatttcctgccctcg
acccatgcctttgtcgatgcggcgctagccggggtcggctgggggatgaatcccgaaagc
ctgatccggcagcatgtggcgcagggcaatctgcatccgctgctgccgcaggcgccgctg
gatgtgcccctgacctggcaggtgagccgggtgctgaccccggcgcttgcccccctgacc
cgcgccgtgcgccgggctgcgagccggggcttgattgccggttga
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