Ruegeria pomeroyi: SPO1101
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Entry
SPO1101 CDS
T00215
Symbol
pccA
Name
(GenBank) propionyl-CoA carboxylase, alpha subunit
KO
K01965
propionyl-CoA carboxylase alpha subunit [EC:
6.4.1.3
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00280
Valine, leucine and isoleucine degradation
sil00630
Glyoxylate and dicarboxylate metabolism
sil00640
Propanoate metabolism
sil01100
Metabolic pathways
sil01110
Biosynthesis of secondary metabolites
sil01120
Microbial metabolism in diverse environments
sil01200
Carbon metabolism
Module
sil_M00373
Ethylmalonyl pathway
sil_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SPO1101 (pccA)
00640 Propanoate metabolism
SPO1101 (pccA)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SPO1101 (pccA)
Enzymes [BR:
sil01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
SPO1101 (pccA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
PCC_BT
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
Biotin_lipoyl_2
RimK
ATPgrasp_ST
GARS_A
ATP-grasp_3
DUF2118
ATP-grasp_5
HlyD_D23
ATP-grasp_2
GCV_H
Motif
Other DBs
NCBI-ProteinID:
AAV94401
UniProt:
Q5LUF3
Structure
PDB
PDBj
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All DBs
Position
1155593..1157638
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AA seq
681 aa
AA seq
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MFNKILIANRGEIACRVIKTARKMGISTVAIYSDADKQALHVQMADEAVHIGPPPANQSY
IVIDKVMAAIRATGAQAVHPGYGFLSENSKFAEALEAEGVIFVGPPKGAIEAMGDKITSK
KIAQEANVSTVPGYMGLIEDADEAVKISNQIGYPVMIKASAGGGGKGMRIAWNDQEAREG
FQSSKNEAANSFGDDRIFIEKFVTQPRHIEIQVLCDSHGNGIYLGERECSIQRRNQKVVE
EAPSPFLDEATRRAMGEQAVALAKAVGYASAGTVEFIVDGQKNFYFLEMNTRLQVEHPVT
ELITGVDLVEQMIRVAAGEPLSITQGDVKLTGWAIENRLYAEDPYRGFLPSIGRLTRYRP
PAETAAGPLLVNGKWQGDAPSGEAAVRNDTGVYEGGEISMYYDPMIAKLCTWAPTRAAAI
EAMRIALDSFEVEGIGHNLPFLSAVMDHPKFISGDMTTAFIAEEYPEGFEGVNLPETDLR
RVAAAAAAMHRVAEIRRTRVSGRMDNHERRVGTEWVVTLQGADFPVTIAADHDGSTVSFD
DGSSMRVTSDWTPGDQLANLMVDGAPLVLKVGKISGGFRIRTRGADLKVHVRTPRQAELA
RLMPEKLPPDTSKMLLCPMPGLIVKVDVEVGQEVQEGQALCTIEAMKMENILRAEKKGVV
AKINASAGNSLAVDDVIMEFE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagatcctgatcgccaaccggggcgaaatcgcctgccgggtcatcaagacg
gcgcgcaagatgggcatttccaccgttgccatctattcggacgcggacaagcaggcgctg
catgtgcagatggctgacgaggcggtgcatatcggcccgccccccgcgaaccagtcctat
atcgtcatcgacaaggtgatggccgccattcgcgccaccggcgcccaggcggtgcacccg
ggctatggcttcctttcggaaaactcgaaattcgccgaggcgcttgaggccgagggcgtg
atctttgtcggccccccgaaaggggcgatcgaggcgatgggcgacaagatcacctcgaag
aagatcgcgcaggaggcaaatgtttcgaccgtgcccggttacatgggcctgatcgaggat
gccgacgaggcggtcaagatctcgaaccagatcggctatccggtgatgatcaaggcctct
gccgggggcggcggcaagggcatgcggatcgcgtggaacgatcaggaggcgcgcgagggc
ttccagagttccaagaacgaggcggcgaactcttttggcgatgaccgtatcttcatcgag
aaattcgtcacccagccgcgccatatcgaaatccaggtgctgtgcgacagccatggcaac
ggcatctatctgggcgagcgcgaatgctcgatccagcgccgcaaccagaaggtcgtcgaa
gaggcgcccagccccttcctcgacgaggccacccgccgcgccatgggcgaacaggccgtg
gccctggccaaggccgtcggctatgccagcgcgggcaccgtcgagttcatcgtcgacggg
cagaagaacttctacttcctggaaatgaacacccgcctgcaggtggaacacccggtgacc
gagctgatcaccggcgtcgatctggtggaacagatgatccgggttgccgcgggcgaaccg
ctgagtatcacccagggtgatgtgaaactgaccggctgggccatcgagaaccggctttat
gccgaggatccctatcgcggcttcctgccctcgatcggccgtctgacccgttaccgcccg
ccggcggaaaccgccgctggcccgttgctggtcaatggcaaatggcagggggatgcgccc
tcgggcgaggcggctgtgcgcaacgataccggcgtctatgagggcggtgagatcagcatg
tattatgatccgatgatcgccaagctctgcacctgggcaccgacccgtgccgctgcgatc
gaggcgatgcgcatcgcgctcgacagtttcgaggtcgaaggcatcggtcacaacctgccg
ttcctcagcgccgtgatggaccacccgaaattcatttcgggcgacatgaccaccgccttt
atcgccgaggaatatcccgaaggcttcgaaggggtgaacctgcccgagaccgatctgcgc
cgggtggccgctgccgccgccgcgatgcaccgtgtcgccgagatccgccgcacccgggtg
tcgggccggatggacaatcacgagcgtcgggtgggcaccgaatgggtggtcacgctgcaa
ggcgccgacttcccggtcaccatcgccgccgatcacgacggatcgaccgtcagctttgac
gatggcagttcgatgcgggtgaccagcgactggactccgggggaccagctggccaacctg
atggtggacggcgcgccgctggtgctgaaggtgggcaagatctcgggcgggttccgtatc
cgcacccggggcgccgacctgaaggtgcatgtgcgcaccccgcgtcaggcggaactggcg
cgcctgatgcccgagaaactgccgccagacacctcgaaaatgctgctctgcccgatgccc
ggcctgatcgtgaaggtcgatgtcgaagtgggccaggaggttcaggagggccaggcgctg
tgcaccatcgaggcgatgaagatggaaaacatcctgcgcgccgagaaaaagggcgtggtc
gccaagatcaatgccagcgccggcaacagcctggccgttgacgacgtgatcatggagttc
gaataa
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