Ruegeria pomeroyi: SPO1138
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Entry
SPO1138 CDS
T00215
Symbol
doeX
Name
(GenBank) AsnC/Lrp-like DNA-binding protein, transcriptional regulator
KO
K15782
Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sil03000
]
SPO1138 (doeX)
Transcription factors [BR:
sil03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
SPO1138 (doeX)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
AsnC_trans_reg
HTH_AsnC-type
HTH_CodY
MarR
HTH_20
HTH_Crp_2
MarR_2
HTH_11
HemN_C
HTH_1
HTH_IclR
Rrf2
TrmB
HTH_PafC
DUF5356
HTH_27
Motif
Other DBs
NCBI-ProteinID:
AAV94438
UniProt:
Q5LUB6
LinkDB
All DBs
Position
complement(1194419..1194898)
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AA seq
159 aa
AA seq
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MQLDQRDLDILRVLSTEGRITKAALADRIGLSPTPCWDRLKKLEQAGLIEGYGARINLKK
LAPHVTVFVAAEIADHTAASFRAFEAAMQRYEEVTACWALGGGFDYLLQIVTRDIDAYQR
LIDEMLDDRIGLSRYFTYVVTKPVKGTGAPPLKILLGLE
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggaccagcgcgacctcgatatcctgcgcgtgctctcgaccgagggccgcatc
accaaggccgcgctggccgaccggatcggcctgtcgccgaccccttgctgggaccggctg
aaaaagctggagcaggccgggctgatcgaaggttatggcgcccgcatcaacctgaagaag
ctggcgccgcatgtgacggtctttgtggcggcagagatcgccgaccacaccgccgccagc
tttcgcgcctttgaagcggcgatgcagcgctatgaagaggtcaccgcctgctgggccctg
ggcggcgggttcgactaccttctacagatcgtcacccgtgacatagacgcctatcagcgg
ctgatcgacgagatgctggacgaccgcatcggcctgtcccgctacttcacctatgttgtg
accaaaccggtcaagggcaccggcgcgccgcccttgaaaattctgctgggtctggagtga
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integrated database retrieval system
