Ruegeria pomeroyi: SPO1187
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Entry
SPO1187 CDS
T00215
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00470
D-Amino acid metabolism
sil00550
Peptidoglycan biosynthesis
sil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SPO1187 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SPO1187 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sil01011
]
SPO1187 (murD)
Enzymes [BR:
sil01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SPO1187 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sil01011
]
Precursor biosynthesis
Amino acid ligase
SPO1187 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
TrkA_N
KARI_N
CbiA
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AAV94483
UniProt:
Q5LU71
LinkDB
All DBs
Position
1240535..1241935
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AA seq
466 aa
AA seq
DB search
MIPVKGFAGANVAVLGLGRSGLATARALRAGGAEALCWDDNPAAREAAEGEGFTIRDLRK
QGVRDDTACLIVSPGIPHLYPAPNPVVAAALEAGVPVDNDIGLFFRSFAGPEWDGFDTLP
RVVAVTGSNGKSTTSALIHHILSEAGRPVQLAGNIGRGVLDIEPGEEGSVVVLELSSYQT
DLARALTPDVAVFTNLSPDHLDRHGGMGGYFAAKRRLFAEGGPDRAVIGVDESEGLYLAG
QMSEGPGDDRVIRVSVSRKLTGPGWQVFARKGYLSEYRKGRQAGSIDLRDIRGLPGAHNH
QNACAAYAACRALGLSPKAIEAGMRSYPGLPHRSQIVAEAGGVTYVNDSKATNVDAALKA
LGAFKRIRWICGGLQKEGGIAALNGGLAEVLKAYVIGREAAGFALQLEVESEVCTTMDEA
VARAMAEAEPGDTVLLAPAAASFDQYDNFERRGEDFMAEVQKRLDG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtcaaagggtttgcgggcgccaatgtggcggttctgggtctgggccgctcg
ggtctggccacggcgcgggccttgcgcgcgggcggcgccgaggcgctgtgttgggatgac
aacccggcggcgcgcgaggcggccgagggcgaggggttcaccatccgcgacctgcgcaag
cagggcgtccgggacgataccgcctgtctgatcgtgtcgccgggcatcccgcatctctat
cccgcgccgaacccggtggtggccgccgcgctggaggccggggtgccggtggataatgat
atcggcctcttcttccggtcgttcgcggggcctgaatgggacgggttcgacacgctgccc
cgcgtggtggcggtgaccggctcgaacggcaagtcgaccacctcggcgctgatccaccac
atcctgagcgaggccgggcggcccgtgcaactggcgggcaatatcgggcgcggggtgctg
gatatcgagccgggagaggagggctcggtcgtggtgctggaactcagcagctatcagacc
gatctggcccgcgcgttgacgccggatgtggcggtgttcaccaatctttcgcccgaccat
ctggatcgccacggcggcatgggcgggtatttcgcggccaagcgccggctctttgccgag
ggcgggccggatcgggcggtgatcggggtggacgagtccgaggggctgtatctggcgggc
cagatgtccgaagggccgggcgatgaccgggtcatccgggtctcggtcagccgcaagctg
accgggccgggctggcaggtgtttgcgcgcaaggggtatctgagcgagtaccgcaagggg
cggcaggcgggctccatcgacctgcgcgacattcgtggcctgccgggggcgcataaccac
cagaacgcctgtgcggcctatgccgcctgccgggcgctggggctgagccccaaggcgatc
gaggcggggatgcgcagctatccgggcctgccgcatcgcagccagatcgtggccgaggcg
ggcggggtcacctatgtcaacgacagcaaggccaccaatgtggacgcggcgctcaaggcg
ctgggcgcgttcaagcggatccgctggatctgtggcggcttgcaaaaggagggcggtatc
gcggcgctgaacggtggtttggcagaggttctgaaggcctatgtgatcgggcgcgaggcc
gccggtttcgcgctgcaactggaggtcgagagcgaggtctgcaccaccatggacgaagcg
gtcgcccgcgccatggccgaggcggagccgggcgatacggtgctgttggctcctgctgcg
gccagcttcgatcaatatgacaatttcgaacgccgtggtgaagatttcatggccgaagtt
caaaagcgtctggacgggtag
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