Ruegeria pomeroyi: SPO1201
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Entry
SPO1201 CDS
T00215
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00470
D-Amino acid metabolism
sil00550
Peptidoglycan biosynthesis
sil01100
Metabolic pathways
sil01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SPO1201 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SPO1201 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SPO1201 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sil01011
]
SPO1201 (ddlB)
Enzymes [BR:
sil01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SPO1201 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sil01011
]
Precursor biosynthesis
Amino acid ligase
SPO1201 (ddlB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
AAV94497
UniProt:
Q5LU57
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All DBs
Position
1253321..1254241
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AA seq
306 aa
AA seq
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MGMSSRTNPKVAVLMGGPSAEREVSLVSGRECAAALRGEGFEVVELDAGSDLCDRLRASA
PDVVFNALHGRWGEDGCVQGLLEWLRIPYTSSGVLASALAMDKERSKEAYRAAGLPVAAS
QLADRAAIEAAHVMQPPYVVKPYNEGSSVGVYIVTEAANGPPVLAPDLPATLMVEEYVPG
RELSTTVLGDRALNVTDIITDGWYDYHAKYSPGGSRHVIPADLPPEIFELCLDYALRAHK
ALGCRGLSRTDFRWDESRGAAGLFLLETNTQPGMTPTSLAPEQALAAGMSFGQLCAWMVE
DASCDR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
ttgggtatgtcgagcaggacaaaccccaaggtggcggtattgatgggcggaccctcggcc
gagcgcgaggtctcgcttgtttcggggcgtgaatgcgccgccgccctgcggggagaaggt
ttcgaggtggtggagctggatgccggctccgacctctgcgaccggttgcgcgcaagcgcg
cccgatgttgtgttcaacgcgctgcatggccgctggggcgaggacggctgcgttcagggc
ctgttggaatggctgcgcatcccctataccagctcgggtgttctggcctcggccctggcg
atggacaaggaacgcagcaaggaagcctatcgcgccgccggactgccggtcgccgccagc
cagctggccgatcgcgccgccatcgaggccgctcatgtgatgcagccgccctatgtggtg
aagccttacaacgagggcagctcggtcggggtctatatcgtgaccgaggcggccaatggc
ccgccggtgctggcgcccgacctgcccgcgaccctgatggttgaggaatatgtgccgggc
cgcgagctgtcgacaaccgtgctgggcgaccgggcgctgaacgtcaccgatatcattacc
gatggctggtatgactatcatgccaaatacagccccggtggctcgcgccatgtgatcccc
gccgatctgccgcccgagattttcgagctgtgcctggactatgccctgcgcgcccacaag
gcgctgggctgccgtggtctcagccggaccgatttccgctgggatgaaagccggggtgcc
gccgggctgttcctgctggaaaccaacacgcaaccgggcatgacgcccacctcgctggcg
cccgaacaggcgcttgccgctggcatgagtttcggtcagctctgcgcctggatggtggag
gatgcctcatgcgatcgctga
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