Ruegeria pomeroyi: SPO1399
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Entry
SPO1399 CDS
T00215
Name
(GenBank) transcriptional regulator, AraC family
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sil03000
]
SPO1399
Transcription factors [BR:
sil03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SPO1399
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AAV94686
UniProt:
Q5LTL5
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Position
1468641..1469612
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AA seq
323 aa
AA seq
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MGQNAAGRHFVFVLDEGFTMQAFSSAVEVVRLLERVRPGTGYRYNALSLSGGPVAASNGF
RLIPDLAAEAVPPRAVIVVVAGVRAGHSAEPALAARLRGWARRGHPVWGISSGVVRLAQA
GLLEGRRVAAHWEDVAYLRDSHPRVQVTASLFVSDGEVMTCAGGGAASDMMLTVLRRDLG
GEIADEIAARLVIDAVRGGGTRQRRALDMRFETRNRVAFAALRLMRANLVPPLPIAAIAR
AQGVSERQLERVFAREFGKTPSALYLDVRFQDARAEVRDSRRSLTEIALDHGYSPAGFAR
GYKRLFGLLPSEDRRQAMSDEIT
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggggcagaacgcggcggggcggcatttcgtctttgtcctcgacgaggggttcaccatg
caggcgttctcttcggcggtcgaggtggtgcgcctgctggaacgggtgcggcccggaacc
ggatatcgctataacgcgctcagcctgtcgggcgggccggtggcggcatcgaacgggttt
cgcctgatccctgatcttgctgccgaagcggtgccgccccgggcggtcatcgtggtggtg
gccggggttcgggccgggcatagcgcggaaccggcgctggcggcgcggttgcgtggctgg
gcgcggcgggggcatccggtctggggcatttcctcgggcgtggtgcggctggcgcaggcg
gggctgctggaagggcgccgggtggccgcccattgggaggacgtcgcctatctgcgcgac
agccatccccgggttcaggtcaccgcctcgctgttcgtgagcgatggcgaggtgatgacc
tgtgccggtggcggggcggccagcgatatgatgctgaccgtgctgcgccgcgatctgggc
ggcgagatcgccgacgagatcgcggcccggctggtgatcgacgcggtgcgcggcggtggc
acccgccagcgccgggcgctggacatgcggttcgagacccgcaaccgggtcgcctttgcc
gcgctgcgtctgatgcgcgccaatctggtgccgcccctgccgattgccgccattgcccgg
gcgcagggcgtgtcggaacgccagctggaacgtgtctttgcccgcgagttcggcaagacc
cccagcgcgctttacctggacgtgcggtttcaggatgcccgcgccgaagtgcgcgacagc
cgccgcagcctgaccgagatcgcgctggatcacggctatagcccggcggggtttgcgcgg
ggctacaagcggttgtttggccttctcccgtccgaggatcggcggcaggccatgtcggat
gagatcacttga
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