Ruegeria pomeroyi: SPO1525
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Entry
SPO1525 CDS
T00215
Name
(GenBank) transporter, AcrB/AcrD/AcrF family
KO
K18138
multidrug efflux pump
Organism
sil
Ruegeria pomeroyi
Pathway
sil01501
beta-Lactam resistance
sil01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SPO1525
01503 Cationic antimicrobial peptide (CAMP) resistance
SPO1525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPO1525
01504 Antimicrobial resistance genes [BR:
sil01504
]
SPO1525
Transporters [BR:
sil02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SPO1525
Antimicrobial resistance genes [BR:
sil01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SPO1525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AAV94812
UniProt:
Q5LT89
LinkDB
All DBs
Position
complement(1601622..1604828)
Genome browser
AA seq
1068 aa
AA seq
DB search
MSEGSQNTPLGIAGGLTRGFIGSALTPLMILAALAMGLVALISLPREEEPQISVPLVDIH
IQAPGLKAEDAVKLVTEPMETIVKAIGDVDHVYSQTGDDYAMVTARFLVGTPADTAILRV
HDKVRANMDRIPVGIGEPLIVGRGIDDVAIVSLTLSPRDGAGDVSANDLTRIARELQVQL
AKIGDVGLTYLVGEAPEAIRIAPDPERLALYGVTLQQLAAKVEGANRALATGLVRDGGEQ
IALVAGETLHAPAEIANLLLTTRDNRPVYVRDVADVRFVPDTSERIVANVTRDDSGGFRR
SPAVTLALAKRAGANAVVVAEEILHRVHLLEHDLIPDSVEVTVTRDYGETANEKANELLF
HLGLATVSIVVLVLFSIGWRESIVVAVVIPVTILLTLFAAWVMGYTLNRVSLFALIFSIG
ILVDDAIVVIENIARHWAMPDSASRTQKAIRAVAEVGNPTIVATLTVVAALLPMLFVSGL
MGPYMSPIPANASAAMIFSFFVAVIITPWLMVKIAGRAPAHAHDAAAQHGGALGRLYRAV
ARPLLRTKSGSGLFLLVAAVLSFGSLGALYTRDVTVKLLPFDNKSELSVVIDLPEGASVE
DTDAVAQQVARRVLELPEVISAQTHAGDAAPFNFNGLVRHYYLRARPELGDVQINLLPKD
ARTRTSHDIALDIRERLSTLDLPEGTVLKTVEPPPGPPVIATLLAEVYGPDADSRRAAAT
RIREAFESVPFVVDVDDSFGTQARRLRATVSTDQLEFFGVQERDVFSTLAILNAGQTVGY
SHRGEGRRPIPIEVARDSADRVVDERFLSTPVPANVLPGARGVVELGDVVELREERASYP
VFRHNGRAAEMVMAELAGDFEAPLYGMLAVAEALDAMDWPEGGKPQIRLNGQPEDESVIT
LLWDGEWEVTWITFRDMGAAFGVALLGIYILVVAQFGSFRLPLVVLTPVPLTFLGIIIGH
WLFNAPFSAPSMIGFIALAGIIVRNSILLVDFIRHANPERDKIETLIEAGAIRFKPILLT
AVAAMIGAAVILTDPIFQGLALSLLFGLLSSTLLTVLVIPAIYRVFKT
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagggatcacagaacacgcccctggggatcgcgggcgggctgacacgcggtttc
atcggctcggccctgacgccgctgatgatcctggcggcccttgccatggggctggtggcg
ctgatcagcctgccgcgcgaggaagagccgcagatctcggtgccgctggtcgatatccat
atccaagcgccggggctcaaggccgaggatgcggtgaaactggtcaccgaaccgatggag
accatcgtcaaggcgatcggcgatgtggaccatgtctattcgcagaccggcgacgattat
gccatggtcaccgcccggttcctggtcggtacacccgccgataccgccatcctgcgcgta
catgacaaagtgcgcgccaacatggaccgcatcccggtgggcatcggtgaaccgctgatc
gtcgggcgcggcatcgacgatgtggccatcgtctcgctgaccctgtccccgcgcgacggg
gccggggatgtctcggccaacgacctgacccgcatcgcgcgcgagttgcaggtgcagctg
gccaagatcggcgatgtgggcctgacctatctggtgggcgaggcgcccgaggcgatccgc
atcgcgcccgaccccgagcggctggcgctttacggcgtgacgctgcaacagctggcggcc
aaggtcgagggcgccaaccgggcactggccaccgggctggtgcgcgacggtggtgaacag
atcgcgctggtggcgggcgagacgctgcacgcgcccgccgagatcgccaacctgctgctg
accacccgcgacaaccggcccgtctatgtgcgcgacgtggccgatgtgcgctttgtcccc
gacacgtccgagcggatcgtggccaatgtcacccgcgacgacagtggcgggttccgccgc
agcccggctgtgacgctggcgctggccaagcgcgccggggccaatgccgtggtggtggcc
gaagagatcctgcaccgggtgcatctgctggaacacgatctgatccccgacagtgtcgag
gttaccgtcacccgcgactatggtgaaaccgccaatgaaaaggccaacgagctgctgttc
cacctgggcctggccaccgtgtccatcgttgtgctggtgctgttctcgatcggctggcgc
gaaagcatcgtggtcgccgtggtgatcccggtcaccatcctgctgaccctctttgcggcc
tgggtcatgggctacacgctgaaccgggtgtcgctgtttgcgctgatcttttccatcggc
atcctcgtcgatgacgccatcgtggtgatcgagaacatcgcccgccactgggccatgccc
gacagtgccagccgcacccaaaaggcgatccgcgcagtggccgaggtgggcaaccccacc
atcgtcgccacgctgaccgtggtggcggcgctgttgccgatgctgttcgtttcggggctg
atggggccgtatatgagcccgatccccgccaatgcctcggcggcgatgatcttttccttt
ttcgtggcggtcatcatcacgccctggctgatggtcaagatcgcgggccgcgcgcccgcc
catgcccatgacgcagccgcccagcacggcggcgcgctggggcgtctctatcgcgcggtg
gcgcgcccgctcttgcgcaccaaatccggcagcgggctgttcctgctggtggcggcggtg
ttgtcctttggctcgctgggcgcgctttatacccgcgacgtgacggtcaagctcttgccg
tttgacaacaagtccgagctgtcggtggtgatcgacctgcccgagggcgcctcggtcgag
gataccgacgcggtggcgcaacaggtggcgcgccgggtgctggaactgcccgaggtgatc
tcggcccagactcatgcgggcgatgcggcacctttcaacttcaacgggctggtgcgccat
tactatctgcgcgcccggcccgagctgggcgatgtgcagatcaacctgttgcccaaggat
gcgcgcacccgcaccagccacgacatcgcgctggatatccgcgagcggctgtccacgctc
gacctgccagagggcacggtgctgaaaacggtcgagccgccccccggcccgccggtcatc
gccaccctgctggccgaggtctatggccccgatgccgacagccgccgcgccgctgccacc
cgcatccgcgaggcctttgaaagcgtgcctttcgtggtcgatgtggacgacagtttcggc
actcaggcccgccgcctcagggcgacggtctcgaccgatcagctggaattcttcggcgtg
caggagcgggacgtcttctcgaccctggcgatcttgaacgcgggccagacggtgggctat
tcgcaccggggcgagggccgccgcccgatccccatcgaggtcgcgcgcgacagcgccgac
cgggtggtggacgagcggttcctgtcgaccccggttccggccaatgtgctgcccggcgcg
cgcggcgtggtcgagctgggcgatgtggtcgagctgcgcgaagagcgcgcctcctacccc
gtgttccgccacaacgggcgcgccgccgagatggtgatggccgaactggccggtgacttc
gaggcgccgctctatggcatgctggcggttgccgaggcgctggacgcgatggactggccc
gaagggggcaagccccagatccgcctgaacggccagcccgaggatgaaagcgtcatcacc
ctgctgtgggacggcgaatgggaggtcacctggatcaccttccgcgacatgggcgcggcc
tttggcgtggcgctattgggcatctacatcctggtggtggcgcaattcggttcgttccgg
ctgccgctggtggtgctgacgccggtgccgctgacctttctgggcatcatcatcgggcat
tggctgttcaatgcgcccttttcggcgccctcgatgatcggcttcatcgcgctggcgggg
atcatcgtgcgcaactcgatcctgctggtggatttcatccgccacgccaatcccgaacgc
gacaagatcgagacgctgatcgaggccggggcgatccggttcaagccgatcctgctgaca
gcggtggcggcgatgatcggggcggcggtgatcctgaccgacccgatctttcaggggctg
gcgctgtcgctgttgttcgggctgctcagctcgaccctgctgacggtgctggtgatcccg
gccatctaccgcgtgttcaagacctga
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