Ruegeria pomeroyi: SPO1572
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Entry
SPO1572 CDS
T00215
Symbol
glyA-1
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00260
Glycine, serine and threonine metabolism
sil00460
Cyanoamino acid metabolism
sil00630
Glyoxylate and dicarboxylate metabolism
sil00670
One carbon pool by folate
sil00680
Methane metabolism
sil01100
Metabolic pathways
sil01110
Biosynthesis of secondary metabolites
sil01120
Microbial metabolism in diverse environments
sil01200
Carbon metabolism
sil01230
Biosynthesis of amino acids
sil01240
Biosynthesis of cofactors
sil04981
Folate transport and metabolism
Module
sil_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SPO1572 (glyA-1)
09102 Energy metabolism
00680 Methane metabolism
SPO1572 (glyA-1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SPO1572 (glyA-1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SPO1572 (glyA-1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SPO1572 (glyA-1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SPO1572 (glyA-1)
Enzymes [BR:
sil01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SPO1572 (glyA-1)
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AAV94859
UniProt:
Q5LPA8
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All DBs
Position
1664625..1665920
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AA seq
431 aa
AA seq
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MNASHQDTGFFTEALSERDPELFGAITSELGRQRDEIELIASENIVSAAVMQAQGSVMTN
KYAEGYPGRRYYGGCQYVDIAENLAIERAKQLFGCGFANVQPNSGSQANQGVFQALIKPG
DTILGMSLDAGGHLTHGAAPNQSGKWFNAVQYGVRQQDNLLDYDQVEALAKEHRPKLIIA
GGSAIPRQIDFARMREIADMVGAYLHVDMAHFAGLVAAGEHPSPFPHAHVATTTTHKTLR
GPRGGMILTNDEDIAKKVNSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFKTYIQQVIAN
AQALSDQLIKGGLDTVTHGTDTHVVLVDLRPKGVKGNATEKALGRAHITCNKNGVPFDPE
KPTVTSGIRLGSPAGTTRGFAETEFRQIADWIIEVVDGLAANGEDANEAVEDKVKAQVAA
LCAKFPIYPNL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgagccaccaggataccggatttttcacagaggcgctttcggagcgtgatccc
gagctgttcggggcgatcacgtccgagctggggcgtcagcgcgacgagatcgagctgatc
gcgtcggaaaacatcgtttccgccgccgtgatgcaggcgcagggctcggtgatgaccaac
aaatacgccgaaggctaccccggccggcgctattacggcggctgccagtatgtcgacatc
gccgagaacctggcgatcgagcgggccaagcagctgtttggctgcggctttgccaatgtg
cagcccaactcgggcagccaggccaaccagggcgtgttccaggcgctgatcaagccgggc
gacaccatcctgggcatgagcctggacgcgggcggccacctgacccatggcgccgcgccc
aaccagtcgggcaaatggttcaacgcggtgcaatacggcgtgcgccagcaggacaacctg
ctggattacgaccaggtcgaggcgctggccaaggagcaccggcccaagctgatcatcgcc
ggcggctcggcgattccgcgccagatcgattttgcccggatgcgggagattgcggatatg
gtcggggcctacctccatgtcgatatggcgcatttcgccggtctggttgcggcgggcgag
cacccgagcccgtttccgcacgcgcatgtggccaccacgaccacgcacaagaccctgcgc
gggccccgtggcggtatgatcctcaccaatgatgaagatatcgctaagaaggtgaattcg
gcgatctttcccggtatccagggcggcccgctgatgcatgtgatcgcggccaaggcggtg
gcctttggcgaggcgctgcgccctgaattcaagacgtatattcaacaggttatcgccaat
gcccaagcgctgagcgaccagttgatcaagggcggtctggacacggtgacccatggcacc
gacacccatgtggtgctggtcgacctgcgccccaagggggtcaagggcaacgccaccgaa
aaggctctggggcgcgcgcatatcacctgcaacaagaacggcgtgccgtttgatccggaa
aagccgacggtgaccagcggcatccgcctgggcagccccgcgggcaccacgcgcggcttt
gccgagaccgaattccgccagatcgccgactggatcatcgaggtggtcgatggcctggcc
gccaatggcgaagacgccaacgaggccgtcgaggacaaggtcaaagcccaggtcgcagcc
ctctgcgcaaaattccctatctatccaaacctttga
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