Ruegeria pomeroyi: SPO1644
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Entry
SPO1644 CDS
T00215
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
sil
Ruegeria pomeroyi
Pathway
sil02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPO1644
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPO1644
Transporters [BR:
sil02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SPO1644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
nSTAND1
AAA_29
AAA_25
RsgA_GTPase
AAA
NACHT
NB-ARC
PRK
AAA_16
MeaB
Motif
Other DBs
NCBI-ProteinID:
AAV94931
UniProt:
Q5LSX0
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Position
complement(1747688..1749469)
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AA seq
593 aa
AA seq
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MSDILTIKNLRVEGRPPGGAYVPIVKNVSLNVAKGEVLALIGESGSGKSTISLASMGFAR
PGCRISGGEIWLNGRDIMKLSPHNRHALRGDEVSYVAQSAAASFNPALRIGRQVIEAPLW
HGAGDAATLTATAVDLYRKLDLPNPETVGDKFPHQVSGGQLQRLMAAMAMSCGPDLLILD
EPTTALDVTTQIEVLKAFKDIIRDQGTAAIYVTHDLAVVAQVADRILVLKNGEMVEEGPT
AQILHDPQHEYTRTLMDAVRPAPHLVDHVDASAAQAPVISVRSITTGYGALTILSDVSVD
VPAASVVGVIGESGCGKSTLARVVAGLTPLREGEIKLDGKIAAPSVKDRPRDTLRDCQIV
FQMADTALNPRQRIGDILGRPLEFYQGLKGRARADKVGDLLELVDLPRSFASRFPGELSG
GQKQRINLARALAADPKVILCDEVTSALDTVVAAGVIQLLKSLKDKLGVAYMFISHDLST
VASFADEVVVLYAGRVVEKGPSKAVFSPPFHPYTKLLLSSVPEMRQGWLEGVADTGEAKA
ASAGSVVIGARGCPFANRCTHVIAGTCDRITPPPRDLPGGLTIACHLEEAKLP
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatcctgaccatcaagaacctgcgcgtcgaggggcgcccgcccggtggcgct
tacgtcccgatcgtcaagaacgtgtcactgaacgtggccaagggcgaggtgctggccctg
atcggcgaaagcgggtcgggaaaatccacgatctcgctggcctcgatgggctttgcccgt
cccggctgccgcatctcgggcggcgagatctggctgaacgggcgggacatcatgaaactg
tctccgcacaaccgccacgcactgcgcggtgacgaagtatcttatgtcgcgcaatcggcg
gcggccagcttcaaccccgcgctgcggatcggcaggcaggtgatcgaggcgccgctttgg
catggcgcgggcgatgccgcgaccctgaccgccaccgccgtcgatctataccgcaagctg
gatctgcccaaccccgaaaccgtgggcgacaagttcccgcatcaggtctcgggcgggcag
ttgcaacgcctgatggcggcaatggccatgtcctgcgggccagacctgctgatcctggac
gagccgacaacggcgctggatgtgaccacacagatcgaggtgctgaaagccttcaaggac
atcatccgcgatcagggtacggcggcaatctatgtcactcacgatctggcggtcgtggcg
caggtggcagaccgaattcttgtgctgaaaaacggtgaaatggtcgaggaaggaccgacc
gcccagatcctgcatgacccgcagcacgagtacacccgtaccctgatggatgccgtccgg
cccgcgccgcatctggtcgaccacgttgacgcaagcgcggctcaagcgcctgttatttcc
gtgcgaagcatcacgacaggctacggggcgctgaccattctgtcggatgtgtcggtcgat
gtgcccgccgcctcggtcgtcggcgtgatcggtgaaagcggctgcgggaaaagtacgctg
gcgcgcgtcgtcgccggcctgacacccttgcgggagggcgagatcaagctcgatggcaag
atcgccgcgcccagcgtcaaggaccgcccccgcgatacgctcagggactgccagatcgtg
ttccagatggccgacacggcgctgaacccgcgccagcggatcggagacatcctgggccgc
ccgctggagttctatcaggggctcaaggggcgcgcgcgcgcggacaaggtgggtgacctg
ctggaacttgtcgacctgccgcgcagctttgcctcgcgcttcccgggcgaattgtcgggc
gggcagaagcagcggatcaacctggcgcgcgcgttggccgcggaccccaaggtgatcctt
tgtgacgaggtcacgtcggcgctcgataccgtcgttgcggcgggcgtgatccaacttctg
aaatcgctcaaggacaagttgggcgtcgcctacatgttcatcagccacgacctttcgacc
gttgcgtcattcgccgacgaggtggtggttctatatgccgggcgggtggtcgaaaaggga
ccgtcaaaagccgtcttcagcccgccctttcacccttacaccaaactgctgctctcctcg
gtccccgagatgcgacagggctggctggagggcgtcgccgataccggcgaggccaaggcc
gccagcgccggcagcgtcgtcatcggggcaaggggctgtccctttgccaatcggtgcact
catgtgattgccggcacctgcgacaggatcacaccgcccccccgcgacctgccgggcggg
ctgaccatcgcgtgtcatctggaggaggccaaactgccttga
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