Ruegeria pomeroyi: SPO1656
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Entry
SPO1656 CDS
T00215
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
sil
Ruegeria pomeroyi
Pathway
sil02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPO1656
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPO1656
Transporters [BR:
sil02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SPO1656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
nSTAND1
AAA_22
AAA_29
AAA_16
Rad17
AAA_25
RNA_helicase
PRK
NB-ARC
RsgA_GTPase
NTPase_1
NACHT
AAA
Sigma54_activat
nSTAND3
Mg_chelatase
AAA_13
ATP-synt_ab
DUF87
Septin
CbiA
Motif
Other DBs
NCBI-ProteinID:
AAV94941
UniProt:
Q5LSW0
LinkDB
All DBs
Position
complement(1761893..1764112)
Genome browser
AA seq
739 aa
AA seq
DB search
MIKAGGPAPSPSGLEPVAPQIATPRDIWSKRKKAFFALRQGDKNMSKMAEYDGPILEIDK
LSISFFTRLREIPAVMDFSVTVQPGEAVGLVGESGCGKSTVALGVMQDLGKNGRIVGGTI
KFKGRDLAQMSAEELRDIRGNEIAMIYQEPMASLNPAMKIGRQLMEVPMIHEGVSADEAR
KRALEVVSDVRLPDPERMLNSYPHQLSGGQQQRIVIAMALMSKPALLILDEPTTALDVTV
EAAVVELVKDLGKKYGTSMLFISHNLGLVLETCDRLCVMYSGEAVERGSIKDVFDEMQHP
YTQALFRSIPLPGADKNSRPLVAIPGNFPLPHERPPGCNFGPRCDYFEAGRCDAQDILME
AVPGNDRHHTRCLKFREIDWNAPIMLAAQKEKGEIGEVVLKMDNLKKYYEVSANALFGGG
EKKVVKANETLSFEARESETLAIVGESGCGKSTFAKVLMGLETATDGHILLDNRSIEQIP
IEERDTKTVSDVQMVFQNPFDTLNPSMTVGRQIIRALEIFGIGKTDGERQQRMLELLDLV
KLPRAFAERMPRQLSGGQKQRVGIARAFAGGARIVVADEPVSALDVSVQAAVTDLLMEIQ
REQKTTLLFISHDLSIVRYLSDRVMVMYLGHVVELGTTDQVFSPPYHPYTEALLSAVPIA
DTSVIKEHIVLEGDIPSAMNPPPGCPFQTRCRWKSEVPGGLCDKDVPPVRQLGDGHQVKC
HLSDEVLARMGPVIKIAAE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaagccggggggccagccccgtcgccatctgggctcgaaccagtggcgccgcag
atagcgaccccccgggatatttggagcaagaggaagaaggctttctttgcgctccgacag
ggagacaagaacatgagcaagatggcggaatatgacgggccgatcctggagatcgacaag
ctgtcgatttcctttttcacccggctgcgggagatccccgcggtgatggatttctcggtc
accgttcagcccggcgaggcggtggggctggtcggggaatccggctgcggcaagtccacc
gtggcgctgggggtgatgcaggacctgggcaagaacggccgcatcgtgggcggcaccatc
aagttcaagggtcgcgacctggcgcagatgagcgccgaggagctgcgcgacattcgcggc
aacgagatcgcgatgatctatcaggagccgatggccagcctcaacccggcgatgaagatc
ggcaggcagctgatggaagtgccgatgatccacgaaggcgtgtctgccgacgaggcgcgc
aaacgcgcgctggaagtggtgagcgacgtgcgcctgcccgaccccgagcggatgctcaac
agctatccccaccagctgtcgggcggccagcagcagcgcatcgtcatcgccatggcgctg
atgtcgaaaccggcgctgctgatcctggacgagcccaccaccgcgctcgatgtgacggtc
gaggccgccgtggtcgagctggtcaaggacctgggcaagaaatacggcacctcgatgctg
ttcatcagccacaacctgggcctggtgctggagacctgcgaccggctttgcgtgatgtat
tccggcgaggcggtcgagcgcggctcgatcaaggatgtgttcgacgagatgcagcacccc
tatacccaggcgctgttccgctcgatcccgctgccgggcgccgacaagaacagccgcccg
ctggtggccattcccggcaactttcccctgccgcacgagcgcccgcccggctgcaacttc
gggccgcgctgcgactatttcgaggccgggcgctgcgatgcgcaggacatcctgatggag
gcggtgccgggcaatgaccgccaccacacccgctgcctgaagttccgcgagatcgactgg
aacgcgccgatcatgctcgcggcgcaaaaggaaaagggcgagatcggcgaggtggtcctg
aagatggacaacctcaagaaatactacgaggtctcggccaacgccctgttcggcggcggc
gagaagaaggtggtcaaggccaacgagaccctgtcattcgaggcgcgcgaatccgagacg
ctggccatcgtcggcgagtcgggctgcggcaagtccacattcgccaaggtgctgatgggg
ctggaaaccgccaccgacggccatatcctgctggacaaccgcagcatcgagcagatcccg
atcgaggagcgcgacaccaagaccgtctcggatgtgcagatggtgttccagaacccgttc
gacacgctcaacccgtcgatgaccgtgggccgccagatcatccgcgcgctggaaatcttc
ggcatcggcaagaccgatggcgagcgccagcagcggatgctggaactgctcgacctggtg
aaactgccgcgcgcctttgccgagcggatgccgcgacagctgtcgggcggccagaaacag
cgcgtcggcatcgcccgcgcctttgccggcggcgcccgcatcgtggtggcggacgagccg
gtctcggcgctggacgtgtcggtgcaggcggcggtgaccgacctgctgatggagatccag
cgcgagcagaagacgacgctgctgttcatcagccatgacctgtcgatcgtgcgctatctc
agcgaccgggtgatggtgatgtacctgggccatgtggtcgagttgggcaccaccgaccag
gtgttcagcccgccctaccacccctataccgaggcgctgctgagcgcggtgccgatcgcc
gacacctcggtgatcaaggaacatatcgtgctcgaaggcgacatcccctcggcgatgaac
ccgccgccgggctgcccgttccagacccgctgccgctggaaatccgaagtgcccggcggc
ctgtgcgacaaggacgtgccaccggtgcgccagctgggcgacggccatcaggtgaaatgc
cacctgagcgacgaggtgctggccagaatgggccccgtcatcaaaatcgccgcagagtga
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