Ruegeria pomeroyi: SPO1670
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Entry
SPO1670 CDS
T00215
Name
(GenBank) outer membrane protein, OMP85 family
KO
K07277
outer membrane protein insertion porin family
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sil03029
]
SPO1670
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPO1670
Mitochondrial biogenesis [BR:
sil03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
SPO1670
Transporters [BR:
sil02000
]
Other transporters
Pores ion channels [TC:
1
]
SPO1670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_1
Motif
Other DBs
NCBI-ProteinID:
AAV94955
UniProt:
Q5LSU6
LinkDB
All DBs
Position
1776943..1779306
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AA seq
787 aa
AA seq
DB search
MHNGRGAGTYCGVGVSSRHMLLNSVSAIFLATAMTFAALPQDAQAQDYRFNTVQVDGNQR
IETSTIISRMGIERGKTISAGALNDAYQRLLDSGVFETVELIPRGNTLVVKVVEHPTINR
INFEGNRRVKDETLEGAIGSQSRRVFTPEQAERDAATIAEIYSTQGRVAATVVPRIIRRS
DNRVDLVFEISEGDTIEIERVSFVGNRVFSDRRLRRILETKQAGFLRTFIRSDTFIADRI
EFDKQVLRDFYLSRGHVDFRVNSANVEFTRERDAFFLVMDVTEGQQFSFGKITTVSEIPG
VEAPAYQDVLKIKPGVVYSPSLVENSIARMERLGLKNGVDFLRVEPRITRNDRDLTLDIE
FALVKGPRIFVERIDIEGNTTTLDQVIRRQFRTVEGDPFNPREIRESAERIRALGFFGDA
NVETREGSTPAQVIVDVDVEEKPTGSLSFGGSYSVSDGFGVAIGLTEDNWLGRGQRLGLT
LSTAQDAEQYVLSFTEPQLLGRDLRFDIDLGVANTNSSFASYDTERAFFAPGITFRLGEL
STLQLRYRWEASEMVQRTATTVSGAVIASEIAQGKKSSSALGLTYTYDSRIGGLNPNAGV
LFEVGVDAAGLGGDNEYFKTSAKAIAQTRVWHEEITLRASLDVGAFTWQGSGFSRAIDRF
VIGPNTFRGFEPAGVGPRDQSNGVDDAIGGNYYAVARFEAEFPLGLPEELGLRGGLFYDV
GNVWDVSDVNTAGGTIVGADGSFRHVIGFSLLWTTAFGPLRFNFSKALKKETFDKEQSFD
LTIQARF
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcataacgggagaggcgcaggtacatactgcggcgtcggcgtttcgagccgccatatg
ttgttgaattccgtctcggcaattttccttgccacggcaatgacctttgccgccctgccg
caggatgcgcaggcgcaggattaccggttcaatacggtccaggtcgacggcaaccagcgg
atcgaaacctcgaccatcatctcccggatgggaatcgaacggggcaagacgatctcggcg
ggcgcgctcaacgatgcctatcagcgtttgcttgacagtggtgttttcgaaacagtcgag
ctgattccgcgtggcaatacgctggtggtcaaggtggtcgagcatccgaccatcaaccgg
atcaacttcgagggtaaccgccgggtcaaggacgagacgctcgaaggtgccatcggttcg
caatcgcgccgggtcttcacccccgagcaggccgagcgcgacgccgccaccatcgccgag
atctattcgacccagggccgggtcgccgccaccgtggtgccccgcatcatccgtcgcagc
gacaaccgcgtcgatctggtctttgaaatctccgaaggcgacaccatcgagatcgagcgc
gtgagctttgtcggcaaccgcgtcttttcggaccggcgtctgcgccggatactggagacc
aagcaggccgggttcctgcggaccttcatccgttcggacacgttcatcgccgatcggatc
gaattcgacaaacaggtgctgcgcgatttctatctgtcgcggggccatgtggatttccgc
gtcaacagcgccaatgtcgaattcacccgcgagcgcgacgccttcttcctggtcatggat
gtgaccgaggggcagcaattctcgtttggcaagatcaccacggtcagcgaaattcccggt
gtcgaggcgccggcctatcaggatgtgctgaagatcaagccgggcgtggtctattcgccc
agcctggtcgagaactcgatcgcccggatggagcggctgggtctcaagaacggggtcgat
ttcctgcgggtcgaaccgcgcatcacccgcaatgaccgcgatctgacgctggatatcgaa
ttcgcgctggtcaaggggccgcgcatctttgtcgaacgcatcgacatcgagggcaacacc
accacgctggaccaagtgatccgccgccagttccgcaccgtcgagggtgatccgttcaac
ccgcgcgaaatccgggaaagcgccgaacgtatccgcgcactgggcttctttggcgatgcc
aatgtcgagacccgcgaaggctcgaccccggcacaggtcatcgttgacgtggatgtcgag
gagaagccgaccggctcgctcagcttcggcggcagctattcggtttcggacggtttcggc
gtggccatcggcctgaccgaggacaactggctgggtcgcggccagcggctgggcctgacc
ctgtcgaccgcgcaggatgccgagcagtatgtgctctcgttcaccgagccgcagttgctg
ggccgcgatctgcgctttgacatcgacctcggcgtggcgaacaccaattccagctttgcc
agctatgataccgagcgggccttctttgcgccggggatcaccttccgcctgggcgagctg
tcaaccttgcaactgcgctatcgctgggaggccagcgagatggtgcagcggaccgcgacc
acggtcagtggcgcggtgatcgccagtgaaatcgcgcagggcaagaaatcctccagcgcg
ctggggttgacctatacctatgacagccggatcggtggcctgaaccccaatgcgggcgtg
ttgttcgaggtcggcgtcgatgccgctggtctgggtggcgacaacgagtacttcaagacc
tctgccaaggccatcgcccagacccgcgtctggcacgaagagatcaccctgcgggcctcg
ctcgacgtgggtgcgttcacctggcagggctcgggcttcagccgggcgatcgaccgtttc
gtgatcggtccgaacaccttccgcgggtttgaacccgccggtgtcggcccgcgcgaccag
tcaaacggtgtcgatgacgcgatcggcggcaactattacgcggtggcccggttcgaggcc
gagttcccgctgggcctgcccgaggaactgggcctgcgtggcggcctgttctacgatgtc
ggcaatgtctgggacgtgagcgatgtgaacaccgcgggcggcaccattgtcggcgccgac
ggctcgttccgccatgtgatcggcttctcgctgctgtggaccaccgcctttggcccgctg
cgcttcaacttctccaaagcgctcaagaaagagacctttgacaaggaacagtccttcgac
ctgaccattcaggcgcggttctga
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