Ruegeria pomeroyi: SPO1721
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Entry
SPO1721 CDS
T00215
Name
(GenBank) TRAP dicarboxylate transporter, DctP subunit, putative
KO
K11688
TRAP-type transport system periplasmic protein
Organism
sil
Ruegeria pomeroyi
Pathway
sil02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SPO1721
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPO1721
Transporters [BR:
sil02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SPO1721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
DUF2673
Motif
Other DBs
NCBI-ProteinID:
AAV95003
UniProt:
Q5LSP4
LinkDB
All DBs
Position
complement(1839927..1840949)
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AA seq
340 aa
AA seq
DB search
MGTCPCRSMHPSKEETSMKFTFKVSALAAAVAVAVAAPVAAQEMTLKLGHLANEENSWHK
ASVKFGQELSALTDGRIAVEVFPNESLGKEIDLINGMQLGTVDMTITGESLQNWAPKAAL
LAVPYAFKTIEDMDAFAAGPIGDEIKAQIIEKVQIRPIAYFARGARDLTSNRAITSPADL
NGLKMRVPNVPLFVDVWKALGANPGPMAFSEVFTSLQNGTIESQENPLALIRSASFYEVQ
SHVNLTDHVRSWIYLTIAESTWNKLSADDQNAVMEAAARAQAYERGLFEASLAADRAFLE
SKGMTFVEVDAAAFQAAAKDAVLANVNEEIKPIVEGLFAE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggggacatgcccctgccggtcaatgcacccatccaaggaggaaactagcatgaaattc
acttttaaggtctcggctcttgctgcggcggtcgccgttgccgttgccgcgccagttgcc
gcgcaagaaatgacgctgaagcttggccacctcgccaacgaggaaaactcgtggcacaag
gcttcggtcaagtttggtcaggagctgtcggccctgaccgacggccggatcgctgtcgag
gtcttcccgaacgagtcgctcggcaaggagatcgatctgatcaacggcatgcagcttggc
acggtcgacatgacgatcaccggcgagagcctccagaactgggcgcccaaggccgccctg
ctggccgtgccctacgcgttcaagaccatcgaggacatggacgcttttgccgcgggcccg
atcggtgacgagatcaaggcgcagatcatcgagaaagtgcagatccgaccgatcgcctat
tttgctcgtggcgcccgtgacctgacctcgaaccgcgcgatcacctcgcccgccgacctg
aacggcctgaagatgcgcgtcccgaacgtgcctctttttgtcgacgtttggaaagcgctt
ggggccaaccccggtccgatggcattctcggaggtattcacctcgcttcagaatggcacc
atcgaaagccaggaaaacccgctggccctgatccgttcggcaagcttctatgaggtgcag
agccacgtaaacctgaccgatcatgtccgttcgtggatctacctgaccatcgccgagtcg
acctggaacaagctgtcggctgacgaccagaatgcggtcatggaagccgctgcccgcgcc
caggcctatgagcgtggcctctttgaggcgagccttgccgccgaccgtgccttcctcgaa
agcaagggcatgacgtttgtcgaggtcgatgccgccgccttccaggccgctgcaaaagac
gccgtgctggccaacgtcaacgaagagatcaagcccatcgtggaaggcctttttgccgag
taa
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