Ruegeria pomeroyi: SPO1839
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Entry
SPO1839 CDS
T00215
Name
(GenBank) sugar ABC transporter, periplasmic sugar-binding protein
KO
K10117
raffinose/stachyose/melibiose transport system substrate-binding protein
Organism
sil
Ruegeria pomeroyi
Pathway
sil02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SPO1839
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPO1839
Transporters [BR:
sil02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
SPO1839
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
AAV95118
UniProt:
Q5LSC9
LinkDB
All DBs
Position
complement(1957238..1958488)
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AA seq
416 aa
AA seq
DB search
MKTKALSAILLATTTLGGAAWAETTLTIESWRNDDLTLWQDQIIPAFEASNPGIKVKFTP
SAPAEYNAVLNAKLDAGSAGDLITCRPFDTSLGLYQNGHLADLSDLDGMANFSDVAKSAW
QTDDGAATFCVPMASVIHGFIYNKDAFAELGLSVPETEAEFFDVLEKIKEDGSYIPMAMG
TNDQWEAATMGYNNIGPNYWKGEEGRLALLSGAQKLTDEAWVAPYRALARWGSYLGDGYE
AQTYPDSQNLFTLGRAAIYPAGSWEITGFNAQADFEMGAFKPPVQNAGDKCYISDHTDIA
IGLNAASPNAEAARTFLNWVGSEEFANIYANALPGFFSLSSFDVPMQDPLAQEFVSWRGE
CGSTIRSTYQILSRGTPNLENETWNASVQVIKGAESPEDAGKRLQDGLASWYDPQK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaagcattgagcgcaatacttctggccacgaccacgcttggcggcgcggcc
tgggcggaaaccacgctgaccatcgaaagctggcgcaacgacgacctgaccctgtggcag
gatcagatcattcccgccttcgaggccagcaaccccggcatcaaggtcaaattcaccccc
tcggccccggcggaatacaacgccgtgctgaacgccaagcttgacgcgggatcggccgga
gacctgatcacctgccgccccttcgacacctcgctgggcctttatcagaacggccatctg
gccgatctgagcgatctggacggcatggccaatttctcggacgtggcgaaatccgcctgg
cagaccgatgacggcgccgccaccttctgcgtgccgatggcctcggtcatccatggcttc
atctacaacaaggacgcctttgccgagctggggctgagcgtgcccgagaccgaagccgag
ttctttgacgtgctggagaagatcaaggaggacggcagctatatcccgatggcgatgggc
accaacgaccagtgggaagccgccaccatggggtataacaacatcggcccgaactactgg
aagggcgaggaaggccgcctggcgctgttgagcggtgcgcagaagctgaccgacgaggcc
tgggtcgcgccctatcgcgcgctggccagatggggcagctatctgggcgacgggtacgag
gcgcagacctatcccgacagccagaacctgttcaccctgggccgggccgcaatctatccc
gccggcagctgggagatcaccggtttcaacgcgcaggccgatttcgagatgggcgccttc
aagccgccagtgcagaacgcgggcgacaaatgctatatctcggaccataccgatatcgcc
atcggcctgaacgccgcctcgcccaatgccgaggccgcgcggaccttcctcaactgggtc
ggctcggaagagttcgccaatatctatgccaacgccctgcccggcttcttctcgctgtcg
agtttcgatgtccccatgcaggacccgctggcacaggaattcgtcagctggcgcggcgaa
tgcggctcgaccatccgttcgacctatcagatcctgtcgcgcggcacgccgaacctggag
aacgagacctggaacgcctcggttcaggtgatcaagggcgccgaaagccccgaggatgcg
ggcaagcggctgcaggacggtctggccagctggtacgacccgcagaagtaa
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