Ruegeria pomeroyi: SPO1847
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Entry
SPO1847 CDS
T00215
Name
(GenBank) AMP-binding enzyme
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00061
Fatty acid biosynthesis
sil00071
Fatty acid degradation
sil01100
Metabolic pathways
sil01212
Fatty acid metabolism
sil02024
Quorum sensing
sil04146
Peroxisome
Module
sil_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SPO1847
00071 Fatty acid degradation
SPO1847
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SPO1847
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPO1847
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sil01004
]
SPO1847
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sil04147
]
SPO1847
Enzymes [BR:
sil01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SPO1847
Lipid biosynthesis proteins [BR:
sil01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SPO1847
Exosome [BR:
sil04147
]
Exosomal proteins
Exosomal proteins of breast milk
SPO1847
Exosomal proteins of breast cancer cells
SPO1847
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
SH3_2
Motif
Other DBs
NCBI-ProteinID:
AAV95126
UniProt:
Q5LSC1
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All DBs
Position
complement(1966938..1968824)
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AA seq
628 aa
AA seq
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MDTRTLPAQTVINGVTFNATPGQRPVLVDGTTTISALFQKRCAELGTRTAHREKDLGIWK
AYSWADYWQHAKWIGLALRKLGLKRGEVVSILSEDRKEWAWFDMGIQAVGGIASGVYTTD
SANQLKYLINDSDSRFLIAENEEQLDKYLQIEGEVPGLLNVIILEDEGLHDLNHPRCMMI
DRLYEIGREAEKEEPGAFEAEIAQIRPEDVALLIYTSGTTGMPKGAMLTHENIMAGIEAG
AHRLPTEETDEQLCFLPLCHILERDVSIYFPLASKCTVNFAESPETVFANLQEVSPATFT
AVPRVWEKIYSQVLILAQEATPSGRAAFGMALRAGMKRAQYLVENKPVPAGVAANFWLWD
RLVLRNLRRMLGMDKMRRGGTGAAPISPELLKWYWAIGVPLVEGYGMTETAGIATINTPE
ENRIGTIGRVVPGIDVRIAEGGEIQVRGLNIFKGYWRNNEKTAESFTDDGWLRTGDIGRM
DDDGYVTITGRLKDIIITAGGKNITPAEIESRLKFSHYISDAVIVGDKRKFLTCLIMIDQ
ENVEKFAQDRKVPFSNFASLCAAKEVRELIAAEVAQVNKEFARVEQIKDFRLIDVLLTAE
DDELTATMKLKRSFVEKKHAHLIEDMYK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggatacacgcaccctgcccgcccagaccgtgatcaacggggtcacgttcaacgccacg
ccgggccagcgcccggttctggtggacggcaccaccacgatctcggccctgttccagaaa
cgctgcgccgagctgggcacccgcaccgcgcatcgcgaaaaggacctgggcatctggaaa
gcctattcctgggccgactactggcagcatgccaaatggatcggcctggccctgcgcaag
ctggggctgaaacgcggcgaggtcgtctcgatcctcagcgaggaccgcaaggaatgggcc
tggttcgacatgggcatccaggcggtcggcggcattgcctcgggggtctatacaaccgac
tcggccaaccagctgaaatacctgatcaacgacagcgacagccgcttcctgatcgccgag
aacgaggaacagctggacaagtacctgcagatcgagggcgaggttcccggcctgctcaac
gtcatcatccttgaagacgaggggttgcatgacctgaaccatccccgctgcatgatgatc
gacaggctttatgagatcggtcgcgaggcggaaaaggaagagccgggcgcgttcgaggcc
gagatcgcccagatccggcccgaggatgtggcgctgctgatctatacctcgggcaccacc
ggcatgcccaagggcgcgatgctgacccatgagaacatcatggccgggatcgaggcgggc
gcccatcgcctgccgaccgaggagaccgacgagcagctctgctttctgccgctctgccat
atcctggaacgcgacgtgtcgatctatttcccgctcgcctccaaatgcacggtgaatttc
gccgaaagcccggaaacggtgttcgccaacctgcaagaggtctcgcccgccacctttacc
gcggtgccgcgggtgtgggagaagatctattcccaagtgttgatcctggcgcaagaggcc
acgcccagcgggcgcgcggcctttggcatggcgctgcgcgcgggcatgaagcgcgcgcaa
tacctggttgaaaacaaaccggttcccgccggtgtggccgccaatttctggctgtgggac
cggctggttctgcgcaatctgcgccggatgctgggcatggacaagatgcgccggggcggc
accggggcggcgccgatctcgcccgagctgctgaaatggtactgggccatcggcgtgccg
ctggtcgaaggctacggcatgaccgaaaccgccgggatcgccactatcaacacgcccgag
gaaaaccggatcggcaccatcggcagggtggttcccggcatcgatgtgcgcatcgccgag
ggcggcgagatccaggtcagggggctcaacatcttcaagggctactggcgcaacaacgaa
aagaccgccgaaagctttaccgacgacggctggctgcgtaccggcgatatcgggcggatg
gacgatgatggctatgtcaccatcaccgggcggctcaaggacatcatcatcaccgccggg
ggcaagaacatcaccccggccgagatcgaaagccgtctgaagttcagccattacatctcg
gacgcggtgatcgtcggcgacaagcgcaagttcctgacctgcctgatcatgatcgatcag
gaaaacgtcgagaaattcgcgcaggaccgcaaggtgccgttttcgaacttcgcctcgctc
tgtgccgccaaggaggtgcgcgagctgatcgcggccgaggtggcccaggtgaacaaggaa
ttcgcgcgggtcgagcagatcaaggatttccgcctgatcgacgtgttgctgaccgccgaa
gacgacgagttgaccgcgacgatgaaactgaaacgcagtttcgtcgaaaagaaacacgca
catctcatcgaagatatgtacaaataa
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