Ruegeria pomeroyi: SPO1905
Help
Entry
SPO1905 CDS
T00215
Symbol
fumC
Name
(GenBank) fumarate hydratase, class II
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00020
Citrate cycle (TCA cycle)
sil00620
Pyruvate metabolism
sil00720
Other carbon fixation pathways
sil01100
Metabolic pathways
sil01110
Biosynthesis of secondary metabolites
sil01120
Microbial metabolism in diverse environments
sil01200
Carbon metabolism
Module
sil_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sil_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SPO1905 (fumC)
00620 Pyruvate metabolism
SPO1905 (fumC)
09102 Energy metabolism
00720 Other carbon fixation pathways
SPO1905 (fumC)
Enzymes [BR:
sil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
SPO1905 (fumC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
AAV95183
UniProt:
Q5LS64
LinkDB
All DBs
Position
complement(2027633..2029027)
Genome browser
AA seq
464 aa
AA seq
DB search
MTPTRIETDSFGPLEVPADRYWGAQTQRSIQNFPIGWERQPVAIIRALGVVKKACALRNR
ETGALAQDLADAIVAAADEVIAGRLDDHFPLVVWQTGSGTQSNMNANEVIANRAIELLGG
QLGSKDPVHPNDHVNMGQSSNDTFPTAMHVAAAMMARDVLLPGLYALLAGLEQKAEEFRD
IIKIGRTHTQDATPLTLGQEFSGYAHQIRMGLTRIEAALPGIHELAQGGTAVGTGLNTRA
GWAEAVAANMAEITGLPLVSAPNKFEALAAHDAMVFLSGAIATVAGSCYKIANDIRFLGS
GPRSGLGELILPENEPGSSIMPGKVNPTQAEALTQVAAHVMGNDAAIKFAGSQGHFELNV
YNPMMAYNLLQSMQLLGDAADSFTQRMLLGIRANTARIDQLMRESLMLVTALAPTIGYDN
ATTVAKTAHKNGTTLREEAVRLGFVDAETFDRVVRPEQMIGPRD
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaccccaacccgcatcgagaccgacagttttggcccgctggaggtgcccgccgacagg
tactggggcgcgcagacccaacgctcgatccagaacttcccgatcgggtgggaacgtcag
cccgtcgccatcatccgcgcgctgggtgtggtgaaaaaggcctgcgccctgcgcaaccgc
gaaaccggcgcgctggcccaggatctggcggatgcgattgtcgccgccgccgacgaggtg
atcgcgggccggctggatgatcatttcccgctggtggtctggcagaccggttcgggcacc
cagtcgaacatgaacgccaacgaggtgatcgccaaccgtgcaatcgagcttttgggcgga
cagctgggcagtaaggacccggtgcacccgaacgaccatgtgaacatggggcaatcctcg
aacgacacctttcccaccgcgatgcatgtggctgcggcgatgatggcgcgcgatgttctg
ctgccggggctgtacgccctgctggccgggctggagcagaaggcggaagagttccgcgac
atcatcaagatcggccgcacccatacccaggacgcgacgccgctgaccctaggacaggag
ttctcgggctatgcccatcagatccgcatggggctgacccggatcgaggccgccctgccc
ggcattcatgagctggcccagggcggcaccgccgtgggcaccgggctgaacacacgcgcg
ggctgggccgaggcggtggccgccaacatggccgagatcaccggcctgccgctggtcagc
gcacccaacaagttcgaggcgctggccgcccatgacgcgatggtgttcctgtcaggtgcg
atcgcgacggtggcgggcagctgctacaagatcgccaatgacatccgctttctgggctcc
ggcccccgctcggggctgggagagttgatcctgcccgaaaacgaaccgggcagctcgatc
atgccgggcaaggttaacccgacccaggccgaggcgctgacccaggtcgccgcccatgtg
atgggcaatgacgcggcgatcaagttcgcaggctcgcaaggccatttcgaactgaatgtc
tataatccgatgatggcctataacctgttgcaatccatgcagcttctgggcgatgcggcg
gacagtttcacccagcggatgctgttgggcatccgcgccaacaccgctcggatcgaccag
ttgatgcgcgaaagcctgatgctggtcaccgcattggcccccaccattggttatgacaac
gccaccacggtcgccaagaccgcgcacaagaacggcaccaccctgcgcgaagaagcggtg
cggctgggctttgtcgacgctgagacctttgacagggtggtacgccccgaacagatgatc
gggccccgcgactga
DBGET
integrated database retrieval system