KEGG   Ruegeria pomeroyi: SPO1929
Entry
SPO1929           CDS       T00215                                 
Name
(GenBank) peptidoglycan binding protein, putative
  KO
K21470  L,D-transpeptidase YcbB
Organism
sil  Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:sil00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:sil01002]
    SPO1929
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sil01011]
    SPO1929
Peptidases and inhibitors [BR:sil01002]
 Cysteine peptidases
  Family C82
   SPO1929
Peptidoglycan biosynthesis and degradation proteins [BR:sil01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   SPO1929
SSDB
Motif
Pfam: Scaffold YkuD PG_binding_1
Other DBs
NCBI-ProteinID: AAV95205
UniProt: Q5LS41
LinkDB
Position
2056314..2057927
AA seq 537 aa
MPHLKRPAIRLTLTALLLAGVAVLASPGTADAQVTAYKQAVAEASYGEDGVAAFYRKNGY
QPVWTGEGAEFTARRIALIEALSMADVHGLPAGRYDINGLKAQMAAARTTRDMGLVEVAL
SREFARFARDLQTGLLTPSQIDDGMVRVVERRGAEAYLSELQAAEPGRYMRMLAPNTSQY
RALLKLKLDLEQALATGGWGPTVAGGKLAPGDGGPRVVALRNRLIAMGFMDRSAVASYDG
TLQKAVQAFQLAHGLEADGVAGDGTLDEINKSVADRLKSVIVALERERWLPRDRGERHIL
VNQTDFTAKIVDHGRVTFETRSVIGKNVSDRRSPEFSDEMEHMVINPSWYVPRSIITKEY
LPKLRANPNAVRHLEITDSRGRQVNRGAVDFSQFSSRSFPFAMRQPPGKSNALGLVKFMF
PNKYNIYLHDTPQKDLFAREVRAYSHGCIRLAQPFEFAYALLALQEADPKSFFHNVLNTG
RETKVDLERHVPVHIIYRTAVVDDRGQAGYRRDVYGRDAKIWEALSRAGVVLTAVQG
NT seq 1614 nt   +upstreamnt  +downstreamnt
atgccgcatctcaaacgccctgccattcgtctcacgctgacagccctgctgcttgcaggt
gtggcggtgttggcgtcacccggtacggcagatgcgcaggttaccgcctataaacaggcg
gttgccgaggcgagttatggtgaagacggggtcgccgccttttaccgcaagaacggctat
cagccggtctggacgggcgaaggggccgaattcaccgcccgccgcattgccctgatcgag
gcactgagcatggccgatgtgcacggcctgcccgcggggcgttatgacatcaacgggctg
aaggcgcagatggccgccgcccgcaccacccgcgacatgggtctggtcgaggtggcgctg
agccgcgaattcgcccggttcgcccgcgacttgcaaaccgggctgctgaccccctcgcag
atcgacgacggtatggtccgggttgtcgagcgccgcggcgccgaggcctatctgagcgag
ttgcaggctgccgagcccggccgctatatgcgcatgctggccccgaatacgagccagtac
cgtgccctgctgaagctgaaactggacctggaacaggcgctggccaccggtggctggggc
ccgaccgttgctggcggcaagctggcgccgggtgacggcggtcctcgggtcgtggccctg
cgcaaccggctgatcgccatgggattcatggatcgcagcgcggtggccagttatgacgga
acgctgcaaaaggccgtgcaggcgtttcagctggcgcatgggctcgaagccgatggggtg
gcaggcgacggaacgctcgacgagatcaacaaatcggtcgccgaccggctgaaatcggtg
atcgtggcgctggagcgcgagcgctggctgccgcgcgatcgtggcgagcgccatatcctg
gtcaaccagaccgatttcaccgccaagatcgtcgatcatggccgcgtcacctttgaaacc
cgctcggtcatcggcaagaatgtgagcgatcggcgcagccctgaattctcggatgagatg
gagcatatggtgatcaacccgagctggtatgtgccgcgctcgatcatcaccaaggaatat
ctgccgaagctgcgggcaaacccgaatgcggtgcggcatcttgaaatcacggacagccgt
ggccgtcaggtcaatcgcggagctgtggatttcagccagttttccagccgcagctttccc
tttgccatgcgccagccgccgggcaagagcaacgcgctggggctggtgaagttcatgttc
cccaacaaatacaacatttacctgcatgacacgccgcaaaaggatctgttcgcgcgcgag
gtgcgggcctattcgcatggctgtattcgcctggcgcaaccctttgaatttgcctatgcg
ctgctggcactgcaagaggccgatccgaaatccttctttcataacgtgctgaacaccggt
cgcgagaccaaggtcgatctggaacgccatgttccggtgcacatcatctatcgcacggcg
gtggtcgatgaccgggggcaggcgggctatcgccgtgacgtttacgggcgtgacgcaaag
atttgggaggcgctcagccgggcaggggtggttctgaccgcggttcagggttaa

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