Ruegeria pomeroyi: SPO2007
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Entry
SPO2007 CDS
T00215
Name
(GenBank) spermidine/putrescine ABC transporter, periplasmic substrate-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
sil
Ruegeria pomeroyi
Pathway
sil02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SPO2007
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPO2007
Transporters [BR:
sil02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
SPO2007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AAV95282
UniProt:
Q5LRW4
LinkDB
All DBs
Position
complement(2135833..2136984)
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AA seq
383 aa
AA seq
DB search
MTKKMDNTTRYERLRERYMNGDIDRRGFLGLLGAAGLAYGVQSPFARYAHAAADQVRFDG
WGGVVSEAFRKFAFDPYTAKTGIQVVDGTFGGGDEYLSRVKASQPGEYNIAHLSGVFDYA
RYHGLGLTSELNEANIPNLGLVIPKLVDVFRGVTGGKLSCVPYDYGTTGLAYNRKHISDD
QMQEMGAKILIDDSLKGKIGGWSDWRTRMWYAALQTGQDPNGVTDEEAAWDAVRAHRDLA
LKYWTSGAELMSLLAEEEIYVTEGWSGRIYALQEQGHDIGYMDPPNGFGWQECLFVIKGS
PMEACEELLNFMLAPETSIAVAEGQNYPTALDPTKVDLGDKIPTLPAFDPTGTLSGLTFA
DPDYWNGHEAEWSKTFGRVQKGY
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaaaatggacaacaccacccggtatgagcgcctgcgcgagcgctatatgaac
ggcgatatcgaccggcgcggctttctggggctgctcggtgccgccggtctggcctatggg
gtgcagtcgccctttgcccgctatgcccatgccgccgccgaccaggtgcgctttgatggc
tggggcggcgtggtctccgaggcgttccgcaaattcgcctttgatccttataccgccaag
accggtatccaggtggtcgacggcacctttggcggcggcgacgagtatctgagccgggtc
aaggccagccagccgggcgagtacaatatcgcccacctgtccggcgtattcgattacgcg
cggtatcacgggctggggctgacctcggagctgaacgaggccaatattcccaatctcggg
ctggtgatccccaaactggtcgacgtgttccgcggcgtgaccgggggcaagctgtcctgc
gtgccctatgactacggcaccaccggtctggcctataaccgcaagcatatcagcgacgac
cagatgcaggagatgggcgcgaaaatcctgatcgacgacagcctcaagggcaagatcggc
ggctggagcgactggcgcacccgcatgtggtacgccgcgttgcagaccggacaggatccg
aacggcgtcaccgacgaagaggccgcatgggacgcggtgcgcgcccatcgcgatctggcg
ttgaaatactggacctcgggggccgagttgatgagcctgctggccgaggaagagatctat
gtgaccgaaggctggtcgggccgcatctatgccctgcaggaacagggccacgatatcggc
tatatggatccgcccaacgggttcggctggcaggaatgcctgttcgtgatcaagggctcg
ccgatggaggcctgtgaagaactcttgaacttcatgctggcgccggaaacctcgatcgcg
gtggccgaggggcagaactatcccaccgcgctggacccgaccaaggtcgatctgggcgac
aagatcccgacactgccggcattcgatccgaccggcaccctgtccggtctgacctttgcc
gatcccgactactggaacgggcacgaggccgaatggtccaagacctttggccgcgtgcag
aaagggtattga
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