Ruegeria pomeroyi: SPO2061
Help
Entry
SPO2061 CDS
T00215
Name
(GenBank) indigoidine synthase A family protein
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00240
Pyrimidine metabolism
sil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SPO2061
Enzymes [BR:
sil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
SPO2061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
TPP_enzyme_N
ssDBP
Motif
Other DBs
NCBI-ProteinID:
AAV95332
UniProt:
Q5LRR4
LinkDB
All DBs
Position
2193201..2194115
Genome browser
AA seq
304 aa
AA seq
DB search
MIDLHLSAEVHAARVAGTPIVALESTIITHGMPYPQNVETARAVEQDIRDAGAVPATIAV
IEGRLHVGLDPDQLDALGQAQGVAKLSRADMAACIATGGTGATTVAATMIAARFAGIEVF
ATGGIGGVHKGAEQSFDISADLHELAETPVTVVAAGAKAILDLPKTLEVLETLGVPVIAY
GQDSFPAFWSATSDLPAPLRMDDSASIARAHAARRALGLPGGQLVANPIPADAQIAAEDL
APVIAQAQAQADAQGIAGKAVTPFLLQAIFEATGGRSLTANIALVRNNARLAAKIARDLI
ALGG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacctgcacctgtccgccgaggttcacgccgcccgtgtcgcgggcacccccatc
gtggcgctggaaagcaccatcatcacccatggcatgccctatccgcagaatgtcgagacc
gcccgcgcggtggaacaggacatccgcgacgccggcgccgtgcccgccaccatcgcggtg
atcgaggggcggctgcatgtggggctggaccccgatcagctggacgcgctgggccaggcg
cagggggtggcgaagctctcgcgcgccgacatggccgcctgcatcgccaccggcggcacc
ggtgctaccaccgtggccgccaccatgatcgccgcccggtttgccgggatcgaggtgttt
gccaccggtggcatcggcggcgtgcacaagggggccgagcagagctttgacatctcggcc
gatctgcacgaactggccgagaccccggtcaccgtggttgccgccggggccaaggccatt
ctcgatctgcccaagacgcttgaggtgctggaaaccctcggcgtgccggtcatcgcctat
gggcaggacagctttcccgccttctggtcggcgacctcggatctgcccgcaccgctccgg
atggatgacagcgccagcatcgcccgcgcccatgccgcccgacgcgcgctgggcctgccg
ggcggccagctggtcgccaacccgatcccggcagacgcgcagatcgccgccgaggatctg
gccccggtcatcgcccaggcgcaggcccaggccgatgcgcagggtatcgcgggcaaggca
gtcacgcccttcctgctacaggcgattttcgaggcgaccgggggccgctcgctgaccgcc
aatatcgcgctggtgcggaacaatgcgcgcctggccgcgaaaatcgcccgggatctgatc
gccttggggggctga
DBGET
integrated database retrieval system
