Ruegeria pomeroyi: SPO2081
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Entry
SPO2081 CDS
T00215
Name
(GenBank) nrfA protein
KO
K03666
host factor-I protein
Organism
sil
Ruegeria pomeroyi
Pathway
sil02024
Quorum sensing
sil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPO2081
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPO2081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sil03019
]
SPO2081
03036 Chromosome and associated proteins [BR:
sil03036
]
SPO2081
Messenger RNA biogenesis [BR:
sil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SPO2081
Chromosome and associated proteins [BR:
sil03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
SPO2081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
AAV95352
UniProt:
Q5LRP4
LinkDB
All DBs
Position
complement(2217361..2217600)
Genome browser
AA seq
79 aa
AA seq
DB search
MASDRQNLQDAFLNHVRKTKVPVTIFLINGVKLQGVITWFDNFCVLLRRDGQSQLVYKHA
ISTIMPAQPISLYEGEDAN
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggacagacaaaatctgcaggacgcattcctgaatcacgtcagaaagaccaag
gttccggtcacgattttcctgatcaacggtgtgaaattgcagggtgtgatcacctggttc
gacaacttctgtgtgctgctgcgccgcgacggacagtcgcagctggtctataaacacgcg
atctcgaccatcatgcctgcccagccgatcagcctgtatgagggcgaagacgccaattga
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