Ruegeria pomeroyi: SPO2127
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Entry
SPO2127 CDS
T00215
Name
(GenBank) DNA-3-methyladenine glycosylase II, putative
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPO2127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sil03400
]
SPO2127
Enzymes [BR:
sil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SPO2127
DNA repair and recombination proteins [BR:
sil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPO2127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AAV95396
UniProt:
Q5LRK0
LinkDB
All DBs
Position
complement(2259508..2260140)
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AA seq
210 aa
AA seq
DB search
MTVGRIIETPDCVAEGAAWLAESCPRMAHAMTLTGPLPLRRRPDGFAELLSAIVSQQVSV
ASANAIWARMRAAGLIGPRKILWASDDDLRAAGLSRQKIRYARELAKARIDFNGLRAAPD
ADVVAELTRVPGIGVWTAEIYAMFSLGRADVFAPGDLALQEAARVLYELPERPSERALRQ
MALAWSPWRSVAARVLWAYYRVAKDREGIR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgacggttggacgtatcatcgaaacccccgattgcgtggccgaaggggcggcctggctg
gccgagagctgcccgcgcatggcccatgcgatgacgctgaccgggcccttgccgttgcgc
cggcgcccggatggttttgccgaattgctcagcgccattgtcagccagcaggtcagcgtc
gcctcggccaatgcgatctgggcacggatgcgggcggcgggtctgatcggcccgcgcaag
atcctctgggccagcgacgacgatctgcgcgccgcgggcctgagccggcagaagatccgc
tatgcccgagagcttgccaaggcgcgcattgatttcaatggcttgcgggccgctccggat
gcggatgtggtggccgagctgacccgggtgcccggtatcggtgtctggaccgccgagatc
tatgccatgttcagcctgggtcgcgccgatgtgttcgcgcccggcgatctggccctgcag
gaggcggcgcgcgtcctttatgaactgcccgaacgtcccagcgaacgcgccctgcgacag
atggcgctggcttggtcgccctggcgttcggttgcggcgcgcgtgctctgggcctattac
cgggtggcaaaggacagggaagggatcagatga
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integrated database retrieval system
