KEGG   Ruegeria pomeroyi: SPO2222
Entry
SPO2222           CDS       T00215                                 
Name
(GenBank) pyruvate dehydrogenase complex, E3 component, lipoamide dehydrogenase, putative
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sil  Ruegeria pomeroyi
Pathway
sil00010  Glycolysis / Gluconeogenesis
sil00020  Citrate cycle (TCA cycle)
sil00260  Glycine, serine and threonine metabolism
sil00280  Valine, leucine and isoleucine degradation
sil00310  Lysine degradation
sil00380  Tryptophan metabolism
sil00620  Pyruvate metabolism
sil00630  Glyoxylate and dicarboxylate metabolism
sil00640  Propanoate metabolism
sil00670  One carbon pool by folate
sil00785  Lipoic acid metabolism
sil01100  Metabolic pathways
sil01110  Biosynthesis of secondary metabolites
sil01120  Microbial metabolism in diverse environments
sil01200  Carbon metabolism
sil01210  2-Oxocarboxylic acid metabolism
sil01240  Biosynthesis of cofactors
Module
sil_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sil_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sil_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sil_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sil00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SPO2222
   00020 Citrate cycle (TCA cycle)
    SPO2222
   00620 Pyruvate metabolism
    SPO2222
   00630 Glyoxylate and dicarboxylate metabolism
    SPO2222
   00640 Propanoate metabolism
    SPO2222
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SPO2222
   00280 Valine, leucine and isoleucine degradation
    SPO2222
   00310 Lysine degradation
    SPO2222
   00380 Tryptophan metabolism
    SPO2222
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SPO2222
   00670 One carbon pool by folate
    SPO2222
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sil04147]
    SPO2222
Enzymes [BR:sil01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SPO2222
Exosome [BR:sil04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SPO2222
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 HI0933_like DAO FAD_oxidored GIDA NAD_binding_8 FAD_binding_3 Lys_Orn_oxgnase Thi4 AlaDh_PNT_C 2-Hacid_dh_C DUF5760 3HCDH_N Lycopene_cycl
Other DBs
NCBI-ProteinID: AAV95488
UniProt: Q5LRA7
LinkDB
Position
complement(2363487..2364881)
AA seq 464 aa
MAAQSYDVIVIGAGPGGYVAAIRAAQLGLKACVVEREHLGGICLNWGCIPTKALLRSSEV
FHLMERAKEFGLKADNIGYDLDAVVKRSRGVAKQLSGGIGHLMKKNKIDVVMGEATIPAK
GKVSVKTDKGTQELTAKNIILATGARARELPGLEADGDLVWTYKHALQPVRMPKKLLVIG
SGAIGIEFASFYNTLGADTTVVEVMDRVLPVEDAEISAFAKKSFVKQGMKIMEKSMVKQL
DRAKGKVTAHIETGGKVEKLEFDTVISAVGIVGNVENLGLEALGVKIDRTHVVTDAYCRT
GVEGLYAIGDIAGAPWLAHKASHEGVMVAELIAGKHAHPVKPESIAGCTYCHPQVASVGY
TEAKAKELGYDIKVGRFPFIGNGKAIALGEVEGMIKTIFDAKTGELLGAHMVGAEVTEMI
QGYVVGRQLETTEEDLMHTVFPHPTLSEMMHESVLDAYGRVIHM
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggctgcacaatcctatgacgtgatcgtaatcggcgccgggccggggggctatgtggcc
gccatccgcgcggctcagctggggctcaaggcctgtgtggtcgagcgcgaacatctgggc
ggcatctgcctgaactggggctgcatcccgaccaaggcgctgctgcgctcgtccgaagtg
ttccacctgatggagcgcgccaaggaattcgggctgaaggccgacaatatcggctatgac
ctcgacgcggtggtgaaacgctcgcgcggggtggccaagcagctgtcgggcggcatcggc
catctgatgaagaagaacaagatcgacgtggtgatgggcgaggcgacgatcccggccaag
ggcaaggtttcggtcaagaccgacaagggcacccaggaactgaccgccaagaacatcatc
ctcgccaccggtgcgcgcgcgcgcgaattgccggggctcgaggctgacggcgatctggtc
tggacctacaagcatgcgctgcaaccggtgcggatgcccaagaaactgctggtcatcggc
tcgggcgccatcggcatcgaattcgccagcttctacaacacgctgggcgccgacacgacc
gtggtcgaggtgatggaccgcgttctgccggtcgaagatgccgagatcagcgccttcgcc
aagaagagctttgtcaagcaaggcatgaagatcatggagaaatccatggtcaagcaactg
gaccgcgccaagggaaaggtcactgcccatatcgagaccggcggcaaggtcgagaaactg
gaattcgacaccgtaatctctgctgtcggtatcgtcggcaacgtggaaaacctcgggctc
gaggcgctgggggtcaagatcgaccgcacgcatgtggtgaccgatgcctattgccggacc
ggggttgaggggctgtatgccatcggcgatatcgccggcgcgccctggctggcgcacaag
gcctcccacgagggagtcatggtggccgagctgatcgcgggcaagcatgcccacccggtc
aaacccgaaagcatcgcaggctgcacctattgtcatccgcaggtggcgtcggtcggctat
accgaggccaaggccaaggaactggggtacgacatcaaggtcggccgcttccccttcatc
ggcaacggcaaggcgattgcactgggcgaggtggagggcatgatcaagaccatcttcgac
gccaagacgggcgagctgctgggcgcccatatggtcggcgccgaggtgaccgagatgatc
cagggctatgtggtgggccgccagcttgagaccaccgaagaggacctgatgcacacggtc
ttcccgcatccgacgctgagcgagatgatgcacgaaagcgttctggacgcatacgggcgc
gtcattcacatgtaa

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