Ruegeria pomeroyi: SPO2446
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Entry
SPO2446 CDS
T00215
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sil03012
]
SPO2446
Translation factors [BR:
sil03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
SPO2446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
ABC_tran_CTD
AAA_29
RsgA_GTPase
MMR_HSR1
AAA_30
AAA_18
AAA
AAA_23
AAA_13
Motif
Other DBs
NCBI-ProteinID:
AAV95700
UniProt:
Q5LQP2
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All DBs
Position
2599237..2601087
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AA seq
616 aa
AA seq
DB search
MLRIENITYAVEGRPLFDGASAVIPDGHKVGLVGRNGTGKTTLFRLIRGELALETGTIAL
PRRARIGGVAQEAPASDVSLIDTVLAADTERAALMAEAETATDPIRIAEVQTRLADIDAW
SAPARAASILKGLGFDDDEQLKPCSDFSGGWRMRVALAAVLFSQPDLLLLDEPTNYLDLE
GALWLESYLAKYPHTVIIISHDRGLLNRAVGAILHLEDRKLTLYQGPYEQFARQRAENLA
QAQAMAKKQEARRAHLQSYVDRFRYKADKAKQAQSRLKALARMQPISSPQEAALRAFTFP
KPEEMSPPIIHLEGGVTGYGQTEVLKRLNLRIDQDDRIALLGKNGQGKSTLSKLLSDRLP
LMAGRMTRSPKLRIGYFAQHQVDELYVDETPLDHLRRLRPGETPAKWRARLAGFGLGAEQ
AETAVGRLSGGQKARLSLLIATLDAPHMLILDEPTNHLDIESREALVEALTDYTGAVILV
SHDMHLLTLVADRLWLVSDGSVKPFEGDLEAYRDFLLARDKPESPKPAEAKPKRASRDTV
LALRAELRKCEERVEKLSEMHDKLAAKLADPALYADDKVSDLEVWNRKYAELKDAMERAE
TLWMEAQEKLDAVQAT
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggatcgaaaacatcacttacgcggtcgagggccggccgctgttcgacggtgcc
agcgccgtcattcccgatggccacaaggtcggcctggtgggccgcaacggcaccggcaaa
accacgctgttccggctgatccggggcgagctggcgctggaaaccggcaccatcgccctg
ccccgccgcgcccgcatcggcggcgtcgcacaagaggcgcccgcctcggacgtgtcgctg
atcgacacggtgctggccgcagataccgagcgcgccgcgctgatggccgaggcggaaacc
gccaccgacccgatccgcattgccgaagtgcagacccggctggccgatatcgacgcctgg
agcgcgccggcgcgcgccgcttcgatcctcaaggggctggggttcgacgatgacgaacag
ctcaaaccctgctccgatttctcgggcggctggcggatgcgggtggcgctggcggcggtg
ctgttttcccagcccgacctgctgctgctcgatgaaccgaccaactatctcgacctcgaa
ggggcgctgtggctagaaagctatctggcgaaatacccccatacggtgatcatcatcagc
cacgaccgcgggttgttgaaccgcgccgtgggcgcgatcctgcatctggaggaccgcaag
ctgaccctctatcaggggccctatgaacagttcgcccgccagcgcgccgaaaacctggcc
caggcccaggcgatggccaagaagcaggaggcgcgccgcgcgcatctgcaatcttatgtc
gaccgcttccgctacaaggcggacaaggccaaacaggcgcaatcccgcctcaaggcgctg
gcccggatgcagccgatcagcagcccccaagaggccgcattgcgcgccttcacctttccc
aaaccggaggagatgtcgccgccgatcatccatctcgaaggcggggtgacaggatatggg
cagaccgaggtcctgaaacggctgaacctgcgcatcgaccaggacgaccggatcgcgctg
ttgggcaagaacggtcagggcaaatccaccctgtcgaaactgctctcggaccggctgccg
ctgatggcgggccggatgacccgctcgcccaagctcaggatcggctatttcgcccagcat
caggtcgacgagctgtatgtggacgaaaccccgctcgaccacctgcgccgtctgcgcccg
ggcgagacgcccgccaagtggcgggcgcggctggcgggctttggccttggcgccgagcag
gcggaaaccgcggtggggcggctctcgggcgggcaaaaggcgcgcctcagcctgctgatc
gccacccttgacgcgccccatatgctgatcctcgacgagccgaccaaccaccttgatatc
gaaagccgcgaagcgctggtcgaggcgctgaccgattataccggcgcggtgatcctggtc
agccacgacatgcacctgctgacccttgtcgccgaccggctgtggctggtttcggacggg
tcggtaaaacccttcgagggcgatcttgaggcctatcgcgacttccttctggcgcgcgac
aagccggaatcccccaaaccggcagaggccaagcccaaacgcgccagccgcgacacggtg
ctggcgctgcgggccgagctgcgcaaatgcgaggagcgggtcgagaagctgagcgagatg
cacgacaaactggccgccaaactggccgatcccgcgctttatgccgatgacaaggtctct
gatcttgaggtctggaaccgcaaatatgcggaactgaaggacgcgatggagcgggccgag
accctgtggatggaggcgcaggagaagctcgacgcggtgcaggcgacatga
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