Ruegeria pomeroyi: SPO2552
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Entry
SPO2552 CDS
T00215
Name
(GenBank) peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02034
peptide/nickel transport system permease protein
Organism
sil
Ruegeria pomeroyi
Pathway
sil02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPO2552
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPO2552
Transporters [BR:
sil02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SPO2552
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
ABC_tran
oligo_HPY
AAA_21
OppC_N
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AAV95802
UniProt:
Q5LQD8
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Position
complement(2702095..2703960)
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AA seq
621 aa
AA seq
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MNLFLKLLFRNRLAAMGAVVLGAILLLVLLTPFLPLQDPDVTATADRFKRPFSEGHLLGT
DHLGRDLLSRLLHGTRLSLAVGIAAALVAATIGSTIGIVAGYFGGRVDNIIMRIVDMLMA
FPYILLALAIVAALGPGLMNALIAVAAVNVPFFARNIRGITVGLAGREFIDAARLAGMGH
ARIILTELLPNVLPVIVIAMSTTVGWMILETAGLSFLGLGSQPPQADLGSMLGEARSAMI
SHPHTSIVPGIMIFLIVMSINLLGDGVRDALDPRLRSGALSRPRATTLVERQGDIPAATD
DLLAIQELETQFHVGDRIYRAVGGVSLAVKPGECLGVIGESGSGKSVTALSVMGLVASPP
GVITGGAVRFQGEDLIGAPYETLRQRRGDRVAYIFQDPLSTLHPLYRIGQQLAEAIQSHH
KVSNAEARARAIQLLKDVRIPNAESRVDNYPHEMSGGMRQRVGIAMALANEPDVIIADEP
TTALDVTVQAQILSLLDDLRRDRGLAIIFITHDFGVVAQLCDRVAVMYAGRIVEQGPTQA
VLEAPAHPYTKRLIACVPELGGGRRELAAIPGLPPVVDNLPEGCAFAPRCDKAQESCRAG
DVALKGTAPRAVRCLYPEVAV
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctttctcaagcttctgttccgcaaccgtctggccgccatgggggcggtggtg
ctcggcgcgatccttctgctggttctgctcacgcccttcctgccgctgcaggacccggat
gtgaccgccaccgccgatcggttcaagcgcccgttctccgagggccacctgctgggcacc
gaccatctgggccgcgacctgctcagccgattgctccatggcacccgcctgagccttgcc
gtcgggattgccgcggcgcttgtcgcggccacgatcggatcgaccatcggcatcgtcgcg
ggctatttcggcgggcgcgtggacaacatcatcatgcgcatcgtcgatatgttgatggcc
tttccctacatcctgctggcgctggccattgtggccgcccttggccccgggctgatgaac
gcgctgattgcggtggccgccgtaaacgtgcccttttttgccaggaatattcgcggtatt
accgtgggcctcgcggggcgcgaattcatcgacgccgcgcggctggcgggcatgggacac
gcgcggatcattctgaccgagcttttgccgaatgtcctgccggtcatcgtcatcgccatg
tcgaccacggtgggctggatgatcctggagaccgccggcctcagcttcctcggcctcgga
tcgcaaccaccgcaggccgatcttggctcgatgctgggcgaagcccggtcagcgatgatc
tcgcacccgcatacctcgatcgtgccgggcattatgatcttcctgatcgtcatgtcgatc
aacctgctgggcgacggggtgcgcgatgcgcttgacccacggctgcgctcgggtgcgctg
tcgcggccgcgggcgaccacgcttgtcgagcgccagggcgacatccccgccgcaaccgac
gatcttctggccatacaggaacttgaaactcagttccatgtgggcgaccgcatctatcgg
gccgtgggcggcgtctcgctggcggtaaagcccggggaatgcctgggcgtcatcggcgaa
agcggctcgggcaaatccgtcacggcgctgtcggtcatgggcctcgtggcctcgccgccc
ggcgtgatcaccgggggcgcggtgcgttttcagggcgaagacctgatcggtgcaccctat
gagaccctgcgccagaggcgcggcgaccgggtggcctatatcttccaggacccgctctcg
accctgcatccgctgtaccgcatcgggcaacaactggccgaggcgattcagtcgcatcac
aaggtttcgaatgccgaggcacgcgcgcgcgcgatccaactcctgaaagacgtgcgtatt
ccgaatgccgagtctcgggtagacaactatccacatgagatgtccggtggcatgcgccaa
cgggttggcatcgccatggcgctcgccaatgagcccgatgtgatcatcgcggatgagcca
acgacagcgctcgatgttaccgtgcaggcgcagatcctgtcgctgctcgacgacctgcgc
cgcgacaggggattggcgatcattttcatcactcatgacttcggggtcgtggcacagctg
tgtgaccgggtggcggtcatgtatgccgggcggattgtggagcaagggccgacgcaggcc
gtgctggaagccccggcacacccctataccaaacgcctgatcgcctgtgtgcccgagctt
ggcggcgggcggcgcgagctggcggccattcccggcctgccgccggtggtcgacaacctg
cccgagggctgcgcctttgccccgcgctgcgacaaggcgcaggagagctgccgcgccggg
gatgttgcactgaaaggcaccgcgccccgcgccgtgcgctgcctctacccggaggtggcc
gtctga
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