Ruegeria pomeroyi: SPO2674
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Entry
SPO2674 CDS
T00215
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sil03400
]
SPO2674 (radA)
DNA repair and recombination proteins [BR:
sil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SPO2674 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
DnaB_C
AAA_22
AAA_16
AAA
Lon_C
NTPase_1
SLFN-g3_helicase
AAA_24
AAA_30
nSTAND3
NACHT
AAA_14
DAP3
MCM
MeaB
HepII_C
DUF815
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AAV95919
UniProt:
Q5LQ22
LinkDB
All DBs
Position
2828260..2829621
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AA seq
453 aa
AA seq
DB search
MAKPSFSCSACGASFTKWSGRCEGCGDWNTISQDAGLSAGPAKKSLGAKRGRAVTLTDLA
SEEAPPPRAMSGIGELDRVLGGGLVPASAILVGGDPGIGKSTLLLQAVAAFARKGLKTLY
VSGEEASAQVRMRARRLGLADAPVQLAAETNLRDILTTLEAEKPGLVIIDSIQTMWADNV
DSAPGSVSQVRASAHELTTFAKRTGISVIMVGHVTKDGQIAGPRVVEHMVDTVLYFEGER
GHQFRILRSVKNRFGAADEIGVFEMTGAGLAEVTNPSALFLSERGAPSPGSVVFAGIEGT
RPVLVELQALVAPSPHSQPRRTVVGWDGGRLAMILAVLEARCGIPFAGLDVYLNVAGGLK
ISEPAADLAVAAALLSAREDRALPGDTVIFGEISLSGALRPASQTENRLKEAQKLGFTSA
IAPAGGKTGTLEGLTMTRPTDLVGFVGEFFGAG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaccctctttctcctgctccgcctgcggggcgtccttcaccaaatggtcgggc
cgctgcgaaggctgcggcgactggaacaccatcagccaggatgcgggcctgtcggccggt
ccggccaagaaatcgctcggcgccaagaggggccgggccgtcaccctcaccgatctcgcc
tccgaagaagccccgccgccgcgcgcgatgtcggggatcggggagctggaccgggtattg
ggcggtggtctggtgcccgcctcggcgatcctggtgggcggcgatccgggtatcggcaaa
tccaccctgctgttgcaggcggttgccgcctttgcccgcaagggattgaaaaccctctat
gtctcgggcgaagaggccagcgcccaggtgcgcatgcgcgcgcgccgactggggctggcg
gatgcgccggtgcaactggccgccgagaccaacctgcgcgacatcctcaccacgctcgag
gccgagaaaccgggtcttgtcatcatcgattcgatccagaccatgtgggccgacaatgtc
gacagcgccccgggcagtgtctcccaggtgcgcgcctcggcgcatgagttgaccacattc
gccaagcgcaccggcatttcggtcatcatggtcggccatgtcaccaaggacggtcagatc
gccggcccccgcgtggtcgagcacatggttgacaccgtgctgtacttcgaaggcgagcgc
ggccaccagttccgcatcctgcgcagcgtcaagaaccgtttcggcgcggcggatgagatc
ggcgtgttcgagatgaccggcgccgggctggccgaggtcaccaacccctcggcgctgttc
ctcagcgagcgcggcgcgcccagccccggctcggtggtctttgccgggatcgagggtacc
cgccccgttctggtcgagttgcaggcccttgtcgccccctcgccccacagccagccgcgc
cgcacggtggtgggctgggatggcgggcgcctcgcgatgatcctcgcggtgctcgaggcg
cgttgcggcatcccctttgccgggctcgacgtctatctgaacgtggcgggcgggctgaaa
atctcggagcccgctgccgatctggccgtggccgccgcgcttctcagcgcgcgcgaggac
cgcgcgctgcccggcgacacggtgatttttggcgaaatttccctctcgggcgcgcttaga
cccgcaagccagacggaaaacaggttgaaagaagcgcaaaaacttggtttcacctcagcc
atcgctccggcgggcggcaagaccggcaccctcgaggggctgacgatgacccgccccaca
gatctggtcggctttgtcggcgagttcttcggagccggataa
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