KEGG   Ruegeria pomeroyi: SPO2701
Entry
SPO2701           CDS       T00215                                 
Name
(GenBank) opine/polyamine ABC transporter, periplasmic substrate-binding protein
  KO
K02055  putative spermidine/putrescine transport system substrate-binding protein
Organism
sil  Ruegeria pomeroyi
Pathway
sil02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sil00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SPO2701
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sil02000]
    SPO2701
Transporters [BR:sil02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    SPO2701
SSDB
Motif
Pfam: SBP_bac_8 SBP_bac_1 TMP_3 Hemocyanin_C SHOCT-like_DUF2089-C
Other DBs
NCBI-ProteinID: AAV95946
UniProt: Q5LPZ5
LinkDB
Position
complement(2854506..2855615)
AA seq 369 aa
MQDKQFMKEMLTESAHAYKEGRMDRRTFLALCGASGIAMNAVLAGDAQAAADHVVMWNWG
GQSVECHGSAIGEAFTAATGKGVKFDTSGPLEGKIKEMVDSGNVTADVADADLFNAVSLG
PTGHLEPIDYSIVSKDKTLPGYALEHGVSVILYGYAFVYDTEAYGDNPPKDWKDFFDTAN
FPGTRSLYKWANGSLEAALMADGVAGDALYPLDMERALNKIKSIKDDSIYWGSGSEVHSM
VVNGEVTMAMIWQNRGRNIENDTDGRFKLVNNQAMAMPGAYIVPKGNPAGREAVMQFIAT
AQEVPAQLMLLDCLGMTPSNPAAFGEIPEDQQPYAITSAMNIDKIVYNDPTWWGENGGDA
VNAFLEAIS
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgcaagacaagcaattcatgaaggaaatgctcaccgaaagcgcccatgcctacaaggaa
gggcgcatggaccggcgcacctttctggcgctttgcggtgcctcgggtatcgccatgaat
gccgtactggcgggcgacgcgcaggcggcggccgaccatgtggtgatgtggaactggggt
ggccagtcggtcgaatgccacggctcggccattggcgaggcctttaccgcggccaccggc
aaaggggtgaaattcgacacttccggcccgctcgaaggcaagatcaaggagatggtggac
agcggcaacgtgaccgccgatgtggccgatgccgacctgttcaacgcggtgtcgctgggg
ccgaccgggcatctggaaccgatcgactattccatcgtcagcaaggacaagaccctgccg
ggctatgcgctggaacacggggtctcggtgatcctgtacggatatgccttcgtctatgac
accgaggcctatggcgacaacccgcccaaggattggaaggacttctttgacaccgccaat
ttccctggcacgcggtcgctgtacaaatgggccaacggctctctcgaggcggcgctgatg
gccgatggcgtcgccggtgacgcgctctatccgctcgacatggagcgggcgctgaacaag
atcaagtcgatcaaggatgacagcatctattggggctcgggttccgaagtgcattcgatg
gtggtcaacggcgaggtcaccatggccatgatctggcagaaccggggccgcaacatcgag
aacgataccgatggccgtttcaagctggtcaacaaccaagccatggccatgcccggcgct
tatatcgtgcccaagggcaacccggcgggccgcgaggcggtgatgcagttcatcgccacc
gcgcaggaggtgccggcgcagctcatgctgctcgactgccttggcatgaccccgtcgaac
ccggcggcctttggcgaaatccccgaggatcagcagccctatgcgatcacctcggcgatg
aacatcgacaagatcgtctacaacgacccgacatggtggggcgagaatggcggtgacgcg
gtgaacgccttcctcgaggcgatcagctag

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