Ruegeria pomeroyi: SPO2702
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Entry
SPO2702 CDS
T00215
Name
(GenBank) opine/polyamine ABC transporter, ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
sil
Ruegeria pomeroyi
Pathway
sil02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPO2702
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPO2702
Transporters [BR:
sil02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SPO2702
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_22
AAA_29
nSTAND_NTPase5
AAA_25
nSTAND1
nSTAND3
Mg_chelatase
RsgA_GTPase
AAA
AAA_23
AAA_16
NACHT
TsaE
AAA_15
Rad17
T2SSE
DO-GTPase2
AAA_5
AAA_PrkA
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
AAV95947
UniProt:
Q5LPZ4
LinkDB
All DBs
Position
complement(2855695..2856696)
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AA seq
333 aa
AA seq
DB search
MAEAFSGGSLRIAGVSKYFGTFRAVNAVDLEIRKGEFLTLLGPSGSGKTTLLMMIAGFLD
ITSGDIALDGSSIANVPAEKRNFGMVFQGYALFPHMTVRDNIGYALSVRKRPEAEIRTRV
DEMLELVQLQDFANRKPGQLSGGQQQRVALARALCFAPPVLLLDEPLGALDKKLRVEVQE
QLKDIHRRVGTTFIYVTHDQEEALSMSDRIVIMRDGAIEQVGSPQELYERPATRFAASFL
GKSNFVQQNGQTYALRPEKIDIHLGTGHPQARRKGTITSITYFGSMQRIIVETTEAEQIE
VDIDVWRNQQPLHEGETVELSWQDAAAVDLKES
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggcgttctctggcggcagtctgcggatcgcgggtgtgtcgaagtattttggc
acgttccgggcggtcaacgcggtcgatctggaaatccgcaagggagagttcctgaccctg
ctgggcccttcgggctcgggcaagacgacgctgttgatgatgatcgcggggtttctggac
atcaccagcggtgacatcgcgctggacggaagctcgattgccaatgtgccggcggaaaaa
cgcaacttcgggatggtgtttcagggctatgccctgttcccgcatatgacggtgcgcgac
aatatcggctatgcgctgagcgtgcgcaaacgtcccgaggccgagatccggacccgtgtc
gacgagatgctggaactggtgcagttgcaggatttcgccaaccgcaagcccggccagctg
tcgggcggtcagcaacaacgcgtggcgctggcgcgggcgctgtgtttcgcgccgccggtc
ctgctgctggacgagccgctgggcgcgctcgacaagaagctgcgggtcgaggtgcaggaa
cagctcaaggacattcaccgccgcgtcggcacgaccttcatctacgtcacccatgaccag
gaagaggcgctgtcgatgtccgaccgcatcgtcatcatgcgggacggggccatcgaacag
gtgggctctccgcaagagctgtacgagcggcccgcaacccgctttgccgccagtttcctg
ggcaagtcgaactttgttcaacagaacggccagacctatgcgctgcgccccgagaagatc
gacattcacctgggcaccggtcacccgcaggcccggcgtaagggaactattaccagcatc
acctatttcgggtcgatgcagcggatcatcgtcgaaaccaccgaggccgaacagatcgaa
gtggatatcgacgtctggcgcaaccagcagcccctgcacgagggcgagaccgtcgagctg
agctggcaggacgcggcggcggtggacctgaaggaaagctga
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