Ruegeria pomeroyi: SPO2741
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Entry
SPO2741 CDS
T00215
Name
(GenBank) DNA polymerase III, delta prime subunit, putative
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil03030
DNA replication
sil03430
Mismatch repair
sil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPO2741
03430 Mismatch repair
SPO2741
03440 Homologous recombination
SPO2741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sil03032
]
SPO2741
03400 DNA repair and recombination proteins [BR:
sil03400
]
SPO2741
Enzymes [BR:
sil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPO2741
DNA replication proteins [BR:
sil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPO2741
DNA repair and recombination proteins [BR:
sil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPO2741
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
AAA_5
AAA_22
Mg_chelatase
NTPase_1
DNA_pol3_delp_C
AAA_24
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AAV95982
UniProt:
Q5LPV8
LinkDB
All DBs
Position
2932920..2934041
Genome browser
AA seq
373 aa
AA seq
DB search
MTDEIPAPDQAPGAPHPRETPRLFGQDAAEQAFLSAYGSDRLHHGWLLTGPEGVGKATLA
WRIARFLLATPPQSDDGLFGAPPPPDTLDIDPEHPVARRMQAGAEPGLAAITRSLNDQGR
LRAEIVVEDVRKLGRFFGLSAADGGRRVVIVDSADEMNTSAANALLKMLEEPPARTTLLL
VSHQPSRLLPTIRSRCRTLRLTPLSPADMQSALEQAGAGTEVMPEHLAALASGSVGRALR
LLNLDGLALYAELIALLDTMPRLDRPRALALAEVAAARGAAERFDLLLGLIDIALARLAR
SGATGMPPQPEAAMGEAQVLARLAPDPDSGRRWADVAATISARARHGQAVNLDPAALVLD
TVFKMQDTASWGR
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgagatcccagccccggaccaggcgcccggcgcgccgcatccgcgcgagacg
ccccgcctgtttggccaggacgccgccgaacaggcgttcctgagcgcctatggctcggac
cggctgcatcacggctggctgctgaccgggcccgagggggtgggcaaggcaacgctggcc
tggcgcatcgcgcgctttctgctggccacaccgccacaatccgacgacgggctgttcggc
gccccgcccccgcccgatacgctcgacatcgaccccgaacacccggttgcgcgccggatg
caggcgggggccgaacccgggctggcggcgatcacccgctcgcttaacgatcaggggcgc
ctgcgcgccgagatcgtggtcgaggatgtgcgcaagctgggccgcttcttcggtctcagc
gcggccgatggcgggcggcgcgtggtgatcgtggacagcgccgacgagatgaacaccagc
gccgccaacgcgctgttgaagatgctcgaggaaccgcccgcgcgcaccacgctgcttctg
gtttcacaccaaccctcgcgcctgttgccgaccatccgctcgcgctgtcgcaccctgcgc
ctgacaccgctgtcgcccgccgacatgcaatcggcgctggaacaggccggcgccgggacc
gaggtgatgcccgaacatctggccgcactcgcctctggctcggtcgggcgggcgctgcgg
ctgctgaacctcgatggtctggcgctttatgccgagctgatcgcgcttctggatacgatg
ccccgactcgaccgcccgcgcgcgctggcgctggccgaggttgccgccgcgcgcggcgcg
gccgaacggttcgacctgctgctggggctcatcgacatcgcgctggcacggctggcgcgc
agcggggccaccggcatgcccccccagcccgaggccgcgatgggagaggcgcaggttctg
gcccgcctcgcccccgaccccgacagcggccgccgctgggccgatgtggcggccaccatc
tcggcccgggcccggcacgggcaggcggtgaaccttgaccccgcagcgcttgtcctagat
acggtgttcaagatgcaggataccgccagctggggccgatga
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