Ruegeria pomeroyi: SPO3032
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Entry
SPO3032 CDS
T00215
Symbol
edd
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00030
Pentose phosphate pathway
sil01100
Metabolic pathways
sil01120
Microbial metabolism in diverse environments
sil01200
Carbon metabolism
Module
sil_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
SPO3032 (edd)
Enzymes [BR:
sil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
SPO3032 (edd)
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Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
AAV96268
UniProt:
Q5LP20
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All DBs
Position
complement(3237104..3238909)
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AA seq
601 aa
AA seq
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MVHATIAQVTARIVTRSAATRGPYLARIDEARDQGPARAHLSCSGQAHAYAGAGADQQAL
ATGSTGHLGIVTSYNDMLSAHQPFERYPDVLRQAARSVGGTAQVAGGVPAMCDGVTQGAA
GMELSLFSRDVIAMAAGVALSHNTFDAAVFLGVCDKIVPGLVIAAQSFGHLPAVFVPAGP
MTSGLPNDEKAKVRQRFAAGEVGHAALMAAEMAAYHGPGTCTFYGTANTNQMLMEFMGLH
LPGASFVPPGTGLREALTAEAARRSLSLSALGDNYTPVGHVLDERAYVNGIVGLMATGGS
TNLLIHLVAMARAGGILLDWQDFAEISAVVPLVARVYPNGLADVNHFHAAGGLGYTIHTL
LEAGFLHPDTLTVAGRGLELYTREPKLRGDVLSWEAGTETSLNDKILRPASDPFQASGGL
SRLSGSLGTAVMKVSAVAPEHRVVEAPVRVFHDQNEVKAAFKAGELTGDMVVVVRFQGPK
ANGMPELHSLTPILSILQGRGQKVALVTDGRMSGASGKVPAAIHVVPEALEGGPIARLRD
GDLLRVDAEAGVLDILTEGVLARAPATADLSGNQFGTGRDLFAAFRAVVGSADTGASVFG
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggtacatgcgaccatagcgcaggtaacggctcggatcgtcacgcgcagcgccgcgacg
cgcgggccttatctggcgcggatcgatgaggcccgcgaccagggcccggcgcgggcgcat
ctcagctgttcgggacaggcgcatgcctatgccggggcgggggcggatcaacaggcgctg
gccaccggttcgaccgggcatctgggcatcgtcaccagctataacgacatgctttcggcg
catcagccgttcgagcgctacccggatgtattgcgacaggcggcccgttctgtcggcggc
acggcgcaggtggcaggcggggttccggccatgtgcgacggcgtcacccagggcgcggct
ggcatggaactgtcgctgttctcgcgcgacgtgatcgccatggcggcgggggtagcgctc
agccacaatacctttgatgcggcggtgttcctgggcgtctgcgacaagatcgtgccgggg
ctggtgatcgcggcacagagctttggccacctgccggcggtcttcgtgccggccgggccg
atgaccagcggcctgcccaatgatgaaaaggccaaggtgcggcaacgctttgccgccggc
gaggtggggcatgccgcgctgatggccgccgagatggcagcctatcacgggccgggcacc
tgcaccttttacggcactgccaacaccaatcagatgctgatggagttcatgggcctgcac
ctgccgggcgccagtttcgtgccgccgggcaccggcctgcgcgaggcgctgaccgccgag
gcggcgcgccggtcgctgagcctctcggcgctgggcgacaactatactccggtggggcat
gtgctggatgaacgcgcctatgtgaatgggattgtcgggctgatggcgaccggcggctcg
accaacctgctcattcatctggttgccatggcgcgggcagggggcatcctgctcgactgg
caggactttgcagagatttcggcggtggtgccgctggtcgcgcgggtttatcccaacggg
ctggccgatgtgaaccatttccacgcggcgggggggcttggctataccatccacaccctg
ctcgaggccgggttcctgcatcccgacacgttgaccgtggcgggccgggggctggagctc
tatacccgcgaaccaaagctgcgcggcgacgtgctgagttgggaggccgggaccgagacc
agtctcaacgacaagatcctgcgcccggcctcggacccgttccaggccagcggcgggctg
tcgcggctttcggggtcgctgggcacggcggtgatgaaagtctcggcagtggcgccggaa
caccgggtggtcgaggcgcctgtgcgcgtgtttcatgaccagaacgaggtcaaggccgcc
ttcaaggcgggcgaactgaccggcgacatggtggtggtggtccgctttcaggggcccaag
gccaacggtatgcccgagttgcactcgctgacgccgatcctgtcgatcctgcaagggcgc
gggcaaaaggtggcgctggtgaccgacgggcgcatgtcgggggcctcgggcaaggttccg
gcagcgatccacgtggtgcccgaggcgctggagggtgggccgatcgcgcggctgcgcgac
ggcgacctgttgcgggtcgatgccgaggcgggtgtgctcgatatcctgaccgagggcgtg
ctggcgcgcgcaccggccaccgcggacctgtcgggcaatcagttcggcaccgggcgcgac
ctgtttgccgcgtttcgcgccgtggtcggttcggccgataccggcgccagcgtttttgga
ggataa
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