Ruegeria pomeroyi: SPO3046
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Entry
SPO3046 CDS
T00215
Name
(GenBank) oligopeptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
sil
Ruegeria pomeroyi
Pathway
sil02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPO3046
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPO3046
Transporters [BR:
sil02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SPO3046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
nSTAND1
AAA_22
AAA_16
AAA_29
Rad17
AAA_25
RNA_helicase
NB-ARC
PRK
NTPase_1
NACHT
AAA
RsgA_GTPase
Sigma54_activat
nSTAND3
Mg_chelatase
AAA_13
ATP-synt_ab
DUF87
Septin
CbiA
Motif
Other DBs
NCBI-ProteinID:
AAV96282
UniProt:
Q5LP06
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All DBs
Position
complement(3257436..3259523)
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AA seq
695 aa
AA seq
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MTKLAEYDGPILEIDKLSISFFTRLREIPAVMDFSVTVQPGEAVGLVGESGCGKSTVALG
VMQDLGKNGRIVGGTIKFKGRDLAQMSAEELRDIRGNEIAMIYQEPMASLNPAMKIGRQL
MEVPMIHEGVSADEARKRALEVVSDVRLPDPERMLNSYPHQLSGGQQQRIVIAMALMSKP
ALLILDEPTTALDVTVEAAVVELVKDLGKKYGTSMLFISHNLGLVLETCDRLCVMYSGEA
VERGSIKDVFDEMQHPYTQALFRSIPLPGADKNSRPLVAIPGNFPLPHERPPGCNFGPRC
DYFEAGRCDAQDILMEAVPGNDRHHTRCLKFREIDWNAPIMLAAQKEKGEIGEVVLKMDN
LKKYYEVSANALFGGGEKKVVKANETLSFEARESETLAIVGESGCGKSTFAKVLMGLETA
TDGHILLDNRSIEQIPIEERDTKTVSDVQMVFQNPFDTLNPSMTVGRQIIRALEIFGIGK
TDGERQQRMLELLDLVKLPRAFAERMPRQLSGGQKQRVGIARAFAGGARIVVADEPVSAL
DVSVQAAVTDLLMEIQREQKTTLLFISHDLSIVRYLSDRVMVMYLGHVVELGTTDQVFSP
PYHPYTEALLSAVPIADTSVIKEHIVLEGDIPSAMNPPPGCPFQTRCRWKSEVPGGLCDK
DVPPVRQLGDGHQVKCHLSDEVLARMGPVIKIAAE
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaactggcggaatatgacgggccgatcctggagatcgacaagctgtcgatttcc
tttttcacccggctgcgggagatccccgcggtgatggatttctcggtcaccgttcagccc
ggcgaggcggtggggctggtcggggaatccggctgcggcaagtccaccgtggcgctgggg
gtgatgcaggacctgggcaagaacggccgcatcgtgggcggcaccatcaagttcaagggt
cgcgacctggcgcagatgagcgccgaggagctgcgcgacattcgcggcaacgagatcgcg
atgatctatcaggagccgatggccagcctcaacccggcgatgaagatcggcaggcagctg
atggaagtgccgatgatccacgaaggcgtgtctgccgacgaggcgcgcaaacgcgcgctg
gaagtggtgagcgacgtgcgcctgcccgaccccgagcggatgctcaacagctatccccac
cagctgtcgggcggccagcagcagcgcatcgtcatcgccatggcgctgatgtcgaaaccg
gcgctgctgatcctggacgagcccaccaccgcgctcgatgtgacggtcgaggccgccgtg
gtcgagctggtcaaggacctgggcaagaaatacggcacctcgatgctgttcatcagccac
aacctgggcctggtgctggagacctgcgaccggctttgcgtgatgtattccggcgaggcg
gtcgagcgcggctcgatcaaggatgtgttcgacgagatgcagcacccctatacccaggcg
ctgttccgctcgatcccgctgccgggcgccgacaagaacagccgcccgctggtggccatt
cccggcaactttcccctgccgcacgagcgcccgcccggctgcaacttcgggccgcgctgc
gactatttcgaggccgggcgctgcgatgcgcaggacatcctgatggaggcggtgccgggc
aatgaccgccaccacacccgctgcctgaagttccgcgagatcgactggaacgcgccgatc
atgctcgcggcgcaaaaggaaaagggcgagatcggcgaggtggtcctgaagatggacaac
ctcaagaaatactacgaggtctcggccaacgccctgttcggcggcggcgagaagaaggtg
gtcaaggccaacgagaccctgtcattcgaggcgcgcgaatccgagacgctggccatcgtc
ggcgagtcgggctgcggcaagtccacattcgccaaggtgctgatggggctggaaaccgcc
accgacggccatatcctgctggacaaccgcagcatcgagcagatcccgatcgaggagcgc
gacaccaagaccgtctcggatgtgcagatggtgttccagaacccgttcgacacgctcaac
ccgtcgatgaccgtgggccgccagatcatccgcgcgctggaaatcttcggcatcggcaag
accgatggcgagcgccagcagcggatgctggaactgctcgacctggtgaaactgccgcgc
gcctttgccgagcggatgccgcgacagctgtcgggcggccagaaacagcgcgtcggcatc
gcccgcgcctttgccggcggcgcccgcatcgtggtggcggacgagccggtctcggcgctg
gacgtgtcggtgcaggcggcggtgaccgacctgctgatggagatccagcgcgagcagaag
acgacgctgctgttcatcagccatgacctgtcgatcgtgcgctatctcagcgaccgggtg
atggtgatgtacctgggccatgtggtcgagttgggcaccaccgaccaggtgttcagcccg
ccctaccacccctataccgaggcgctgctgagcgcggtgccgatcgccgacacctcggtg
atcaaggaacatatcgtgctcgaaggcgacatcccctcggcgatgaacccgccgccgggc
tgcccgttccagacccgctgccgctggaaatccgaagtgcccggcggcctgtgcgacaag
gacgtgccaccggtgcgccagctgggcgacggccatcaggtgaaatgccacctgagcgac
gaggtgctggccagaatgggccccgtcatcaaaatcgccgcagagtga
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