Ruegeria pomeroyi: SPO3106
Help
Entry
SPO3106 CDS
T00215
Name
(GenBank) PP-loop family protein
KO
K04075
tRNA(Ile)-lysidine synthase [EC:
6.3.4.19
]
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sil03016
]
SPO3106
Enzymes [BR:
sil01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.19 tRNAIle-lysidine synthase
SPO3106
Transfer RNA biogenesis [BR:
sil03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SPO3106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
Asn_synthase
Motif
Other DBs
NCBI-ProteinID:
AAV96341
UniProt:
Q5LNU7
LinkDB
All DBs
Position
complement(3317815..3319074)
Genome browser
AA seq
419 aa
AA seq
DB search
MLLTIGAQDLVNHLRAQFSAQPPRRLGVAVSGGGDSVALMHLLARCFPRGEVKLCVATVD
HGLRSESASEAALVARQAAGLGLPHETLLWTGWTGEGNLQDQARRARYGLLTDWALRNRV
TTVALAHTADDQAETLLMRLGRSAGVSGLAAMAPRRMQDGVVLVRPLLGITRDALRDFLR
AEGIAWAEDPSNEDIRYDRIKARQALAGLAPMGIDAQRLAEVAANMARAREALDWYTFLA
ARDLTRIDGGDVLLEPRGFRTLPDEIARRLLLHIVGWIGGGEYPPRRVAVAEALSALRHE
RSSQLGGCLILGQGRRIRFCREWKAVETLTVPQGALWDGRWVLRGPVVKDGELRALGAAG
LKLCPDWRQTGRPYAALIASPSVWSGADLVAAPLAGLANGWTAELESGEEDFYASLLSH
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtgctcttgacgattggcgcacaggacctcgtaaatcatctcagggcgcagttttcagcc
cagccgccgcggcggctgggcgttgctgtttccgggggcggggattcggttgcgctgatg
catctcctcgcccgctgtttcccccggggcgaggtcaaactctgcgtggcaacggtggat
catggcctgcgctccgagtccgcctccgaggcggccctggtcgcccgtcaggccgccggg
ttgggcttgccgcatgaaacgctgctctggaccggttggaccggcgagggcaatctgcag
gatcaggcgcgccgcgcccgttatgggctgctgaccgactgggcgctgcgcaaccgggtt
accacggttgcgctggcccatactgcggacgatcaggccgaaacgctgctgatgcgactg
ggccgctctgccggcgtgtctggcctcgctgcgatggcgccccggcggatgcaggacggg
gtggtgctggtccggcccctgctgggcatcacccgcgacgcgctgcgcgatttcctgcgt
gccgaggggatcgcctgggccgaggatccgtccaacgaggatatccgctacgatcggatc
aaggcgcgtcaggcgctggcggggctggccccgatggggatcgacgcccagaggctggcc
gaggtggccgcgaacatggcccgcgcgcgcgaggcgctggactggtacacctttctggcg
gcccgcgacctgacccggatcgacggtggcgatgtgctgctggagccgcgcggctttcgc
accctgccggacgagatcgcacggcggttgctgctgcatatcgtcggctggatcggcggc
ggcgaatatccgccgcgccgtgtggccgtcgccgaggccctgtcggccctgcgtcacgag
cgctccagccagctgggcggctgcctgatcctggggcaggggcgccggatccggttctgt
cgcgaatggaaggcggtcgaaaccctcaccgtgccgcagggtgcgttatgggacgggcgc
tgggtgctgcgcggccccgtggtgaaggacggagagctgcgcgcgctgggggctgcgggg
ttgaaactctgccccgactggcgccagaccgggcgcccctatgcggcgctgatcgccagc
ccgtcggtctggagcggtgccgatttggtcgccgcgccgctggccggattggccaatggc
tggaccgctgaactggaaagtggcgaagaagacttctacgcgtcccttttatcgcattga
DBGET
integrated database retrieval system
