Ruegeria pomeroyi: SPO3116
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Entry
SPO3116 CDS
T00215
Symbol
ruvA
Name
(GenBank) Holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
sil
Ruegeria pomeroyi
Pathway
sil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SPO3116 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sil03400
]
SPO3116 (ruvA)
DNA repair and recombination proteins [BR:
sil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SPO3116 (ruvA)
RecFOR pathway proteins
SPO3116 (ruvA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
AAV96352
UniProt:
Q5LNT7
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Position
complement(3326495..3327169)
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AA seq
224 aa
AA seq
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MIGKLTGRLDYRSTDHVLIDVRGVGYIVYCSDRTLAALPGVGEVVALYTDMVVREDLMQL
FGFMSLAEKEWHRLLCSVQGVGAKVSLAILGALGPDGVSRAIALGDWASVKSAKGVGPKT
AQRIVLDLKDKAPGVMAMGGTVAQAMEGAVEVVEVIEPAAPAPRKAAPPGGAGAATAGAL
SALSNLGYGPSDAAAAVAQAAAEAPEAGETDLIRAALRLLAPKT
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcaagttgacggggcggctcgactatcggtccaccgaccatgtgctgatcgat
gtgcgcggggtcggctatatcgtctattgctcggaccggacgctggcggcactgcccggc
gtgggcgaggtggtggcgctttataccgatatggtggtgcgcgaggacctgatgcagctt
tttggcttcatgtcgctggccgagaaggaatggcaccggctgctgtgctcggtccagggg
gtcggggccaaagtgtcgctggccattctgggcgcgctggggccggacggggtgagccgg
gcgattgcgctgggcgactgggcctcggtcaagtcggccaaaggcgtggggccgaagacg
gcgcagcgcatcgtgctcgacctcaaggacaaggcgccgggcgtgatggcgatgggcggc
accgtggcccaggcgatggagggcgcggtagaggtggtcgaggtgatcgaacccgccgct
ccggcaccgcgcaaggccgcgccgcccggcggcgccggtgctgcgaccgctggcgcgctg
tcggcgctgtcaaatctgggctatggcccctcggacgcggccgccgctgtggctcaggcc
gccgccgaagcgcccgaggccggagagacagacctgatccgcgcggcgctgcgcctgctg
gcgcccaagacatga
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