Ruegeria pomeroyi: SPO3127
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Entry
SPO3127 CDS
T00215
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SPO3127 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sil03400
]
SPO3127 (priA)
Enzymes [BR:
sil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPO3127 (priA)
DNA repair and recombination proteins [BR:
sil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SPO3127 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
MarR_2
AAA_22
MerR_1
Imm49
MarR
zf-CHY
ADD_ATRX
Motif
Other DBs
NCBI-ProteinID:
AAV96362
UniProt:
Q5LNS6
LinkDB
All DBs
Position
complement(3335401..3337611)
Genome browser
AA seq
736 aa
AA seq
DB search
MDTGGLDSGGFFEEGALVSVLTTQPLDRTLDYKAPEGGCFVGAFVEVPLGPRKVLGVVWG
PGRGDFDRSRIRSVLRVLDVAPMREEMRSFLGRTADYTLTPMPAMLRLATRAPGLGDPPS
MRKVYRLGGVDPDRMTDARARVLEVLRDYGGLAFTLKELAEMAGVTASVVKGLVKQGAVR
EEDSPRDLPYPHLDPDLPGKALTEDQVRAADSLRAGLRSGRYGTTLLKGVTGAGKTEVYL
EAVAEALRMGRQALVLLPEIALTAEFLSRVEARFGARPAEWHSGATMTERRRVWRMVGQG
AAQLVVGARSALFLPFRDLGLIIVDEEHDTSYKQEDGVLYNARDMAVLRAAICGARVVLA
SATPSLESWANADAGKYERVELTSRFGPAVLPQMQAIDMRAETMQPSSWISPNLRRAVSD
RLAKGEQSLLFLNRRGYAPVTLCRACGQQIGCDHCDARMVEHRFLKRLMCHQCGETKPIP
ETCPHCGAEGRLAPVGPGIERLAEEATASFPEARIAVLSSDMFGTARALKERIEAIAAGE
ADIVIGTQLVAKGHNFPLLTLVGVIDADLGLQGSDLRAAERTFQLMRQVAGRAGRAEKPG
QALLQTYQPEHPVIRAILAGDEERFWRAEAAERQAAGVPPYGRMAGIILSGPEAGPVFDL
GTAMARNDAALRQIGAQVFGPAPAPIARVRGRHRVRLLVKAPKGAPLQEAIARWIAPLRL
KGDLRLSVDIDPQSFL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
ttggacacgggcggcttggacagcggcgggttttttgaagagggagcgctggtctcggtc
ctgaccacgcagccgctcgaccggacgcttgattacaaggcgcccgaaggcggctgtttc
gtgggtgcctttgtcgaggtgccgctgggcccgcgcaaggtgctgggcgtggtctggggg
ccggggcggggtgactttgaccgctccaggattcgctcggtattgcgggtactcgacgtt
gcaccgatgcgggaggagatgagaagttttctgggcaggaccgccgattacacgctgacg
ccgatgcccgcgatgctgcgcctggccacccgcgcgccgggcctgggcgatccgccctcg
atgcgcaaggtttatcggctaggcggtgtggaccccgaccgcatgaccgacgcgcgcgcc
cgcgtgcttgaggtgctgcgcgattatggcgggctggccttcaccctcaaggaactggcc
gaaatggcaggggtgaccgcgtcagtggtcaaggggctggtcaaacaaggcgccgtgcgg
gaagaggacagcccgcgcgatctgccctatccgcatctcgaccccgatctgcccggcaag
gcgctgaccgaggatcaggtccgcgccgccgacagcctgcgcgcggggctgcgcagcggg
cgctacggcaccacgctgctcaagggcgtcaccggtgccggcaagaccgaggtctatctg
gaggcagtggccgaggcgctgcgcatgggccggcaggcgctggtgctgctgcccgagatc
gctttgacggccgagttcctgagccgggtcgaggcgcggttcggggcgcggcccgccgaa
tggcattcgggcgcgaccatgaccgaacgccgccgcgtctggcgcatggtggggcagggc
gcggcgcagctggtggtgggcgcgcgctcggcgctgttcctgccgttccgcgacctgggc
ctgatcatcgtggatgaggaacacgacacctcctacaagcaggaggacggggtactctat
aatgcgcgtgacatggcggtgctgcgcgcggcgatctgcggcgcgcgggtggtgctggcc
agcgccacgccctcgctggaaagctgggccaatgcggatgcgggcaaatacgaacgggtg
gagctgacctcgcgttttggtccggcggtgctgccgcagatgcaggccatcgacatgcgg
gccgagacgatgcagccttccagctggatctcgcccaacctgcgccgggcggtaagcgac
cggctggccaagggggaacaatcgctgcttttcctcaaccggcgcggctatgccccggtc
acgctgtgccgggcctgcgggcaacagatcggctgtgaccattgcgatgcgcgcatggtc
gaacaccggttcctgaaacggttgatgtgccaccagtgcggcgagaccaagccgatcccc
gaaacctgtcctcattgcggcgccgaggggcggctcgcccctgttggtccgggtatcgag
cggttggccgaagaggccaccgccagttttcccgaggcccgcatcgcggtgctcagctcg
gacatgttcggcaccgcccgcgcgctgaaggagcggatcgaggcgattgcggcaggtgag
gcggatatcgtcatcggcacccagttggtggccaaggggcacaactttcccttgctgacg
ctggtgggggtgatcgatgccgatctgggcctgcagggctcggacctgcgcgccgccgag
cgcaccttccagctgatgcggcaggtggcgggccgggcggggcgcgccgagaaaccgggc
caggcgctgttgcagacctatcagcccgaacacccggtgatccgcgccatccttgcgggg
gacgaggaacggttctggcgtgccgaggcggctgagcgtcaggccgccggagtgccgccc
tatgggcggatggcggggatcatcctgtcgggccccgaggctgggccggtcttcgatctc
ggcaccgccatggcacgcaacgacgcagccctgcgccagatcggggcgcaggtctttggc
ccggcacccgcgcccatcgcccgcgtccggggccgccatcgggtgcggctcttggtcaag
gcgcccaagggcgcccccctgcaagaggcgatcgcccgctggatcgcgccgctgcggctg
aagggcgatctgcgcctcagtgtcgatatcgacccacagagctttctttga
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