Ruegeria pomeroyi: SPO3130
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Entry
SPO3130 CDS
T00215
Symbol
xerC
Name
(GenBank) tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sil03036
]
SPO3130 (xerC)
Chromosome and associated proteins [BR:
sil03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
SPO3130 (xerC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AAV96365
UniProt:
Q5LNS3
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All DBs
Position
3339309..3340229
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AA seq
306 aa
AA seq
DB search
MSLISPACRDALQLWLDTQRALAGRAENTITAYRTDVVEFMSFMTLHFGATQGLAPLARI
GVPDMRAWMAQMRADGIGARSLARKLSAVKSFYRWLAEREGFEPTAVLSTRAPKFQRKLP
RPLAEDAARAMIDTVELQSSKPWIAARDMAVVTLLYGCGLRISEALSLTGRAAPLPATLR
IRGKGGKERLVPVIPVARAAVDTYLRLCPWPVEPETPLFRGARGGPLNARSIQAVMAKAR
MQLGLPATATPHAMRHSFATHLLEAGGDLRAIQELLGHASLSTTQAYTAVDTAHLMDVYN
RSHPKA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctgatctcacccgcctgccgcgatgcgttgcagctttggctggacacgcaacgg
gcactggcgggtcgggccgagaacaccatcaccgcctatcgcaccgatgtggtcgagttc
atgtccttcatgaccctgcatttcggcgcgacacaggggctggcgccgctggcccgtatc
ggggttcccgacatgcgggcctggatggcgcagatgcgcgcggacgggatcggcgcccgc
tcgctggcgcgcaagctgtcggcggtcaagagcttctatcgctggctggccgaacgcgag
gggttcgaaccgaccgccgtcctgtcgacccgagcgccgaagttccagaggaagctgccc
cgcccgctggccgaggatgcggcgcgcgccatgatcgacacggtcgagttgcaatcgagc
aaaccctggatcgccgcccgggacatggcggtggtgacccttctttatggctgcgggctg
cgcatctccgaggcgctgtcgctcaccgggcgcgcggcgccgctgcctgccacgcttcgc
attcgcggcaagggcggcaaggagcgtctggttccggtgatccccgtcgcccgcgcggcg
gttgacacctatctgcggctttgcccctggccggtggagcccgagacaccgctgtttcgc
ggcgcccggggcggcccgctgaacgcccgcagcatccaggcggtgatggccaaggcgcgg
atgcagctgggcctgcccgccaccgccacgccacatgcaatgcgccacagcttcgccacc
catctgcttgaggctggcggcgatctgcgcgcgatacaggaactgctcggccatgcctcg
ctgtcgaccacccaggcctataccgccgtcgacaccgcccatctgatggatgtctacaac
cgcagccatccaaaggcctga
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