Ruegeria pomeroyi: SPO3143
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Entry
SPO3143 CDS
T00215
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sil03016
]
SPO3143 (truA)
Enzymes [BR:
sil01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SPO3143 (truA)
Transfer RNA biogenesis [BR:
sil03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SPO3143 (truA)
Prokaryotic type
SPO3143 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AAV96378
UniProt:
Q5LNR0
LinkDB
All DBs
Position
3351839..3352627
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AA seq
262 aa
AA seq
DB search
MPRYALKVEYLGTPFAGWQRQKDLPSVQGAIETALARLEPGPHTIAAAGRTDAGVHGLGQ
VAHCDLTRDWDPFRLSEALNYHLKPQPVAITAAARVAEDWHARFSATERQYLFRLLMRRA
PATHDAGLVWQVGHRLDARAMQAAADLLLGRHDFTTFRSSICQAASPVKTLDELRVEAVE
SFSGPEIRFHVRARSFLHNQVRSFVGTLERVGAGAWAPEDVRSALEARDRAACGPVCPPQ
GLYLARVGYPEPVFAADRSAAS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgccacgctatgcattgaaagtcgaatatctgggcaccccgtttgccggttggcagcgg
cagaaggacctgccctcggttcagggcgccatcgagacggccctggcgcggctggaaccg
gggccccataccatcgctgcggccggccgcaccgatgcgggggtgcatgggttgggccag
gtggcccattgcgacctgacccgcgactgggacccgttccgcctgtcggaggcgctgaac
tatcacctgaaaccgcagccggtggcgatcaccgccgccgcgcgggtggccgaggactgg
catgcccgcttttcggctaccgagagacaatatctgttccgcctgctgatgcggcgggcg
ccggcgacccatgatgccggtctggtctggcaggtcgggcaccggctggacgcgcgcgcc
atgcaggccgcggccgatctgttgctgggccggcacgatttcaccaccttccgctcgtcg
atctgccaggccgccagcccggtcaagacgctggacgaattgcgcgtcgaggcggtggag
agcttctcgggtcccgagatccggttccacgtgcgggcgcgctcgttcctgcacaatcag
gtccgcagtttcgtgggcacgctggagcgcgtgggcgcgggggcatgggcgcccgaggat
gtgcgcagtgcactggaggcacgcgaccgcgccgcctgtggaccggtctgtccgccgcag
ggcctctatctggcgcgggtgggctatcccgagccggtctttgccgccgacaggtccgcc
gcctcctga
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