Ruegeria pomeroyi: SPO3179
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Entry
SPO3179 CDS
T00215
Name
(GenBank) transcriptional regulator, AsnC family
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sil03000
]
SPO3179
Transcription factors [BR:
sil03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
SPO3179
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
AsnC_trans_reg
HTH_AsnC-type
HTH_Crp_2
NirdL-like_HTH
HTH_11
HTH_20
MarR_2
HTH_31
HTH_IclR
HTH_Tnp_ISL3
HTH_50
MarR
HTH_3
HTH_23
HTH_19
DnaD_N
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
AAV96414
UniProt:
Q5LNM4
LinkDB
All DBs
Position
3388749..3389207
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AA seq
152 aa
AA seq
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MRKIDHIDTRLLKELQRDASLSQRDLADRVGLSQNACWRRLKALTDEGVLKGSSARVARE
KLGLDLVVFVMLRTRHHSAEWLQKFRTHVLTIPEVVDFHRIGGDYDYQLKVVTRDMASYD
KVYQRLIEKVELDSVTSYFAMEAIAEGRPLPL
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaatcgaccatatcgacacgaggctgctgaaagagctccaacgcgatgcctcg
ctcagccagcgggacctggccgaccgggtcgggctgtcgcagaatgcctgctggcggcgc
ctaaaggcgctgacggatgagggcgtgctcaaagggtcgagcgctcgcgtcgcgcgcgag
aaactggggctggatctggtggtcttcgtcatgctgcgcacgcggcaccattcggccgag
tggctgcagaaattccgcacccatgtgctgaccatccccgaagtggtggatttccaccgc
atcgggggcgattacgactatcagctcaaggtggtgacgcgtgacatggccagctatgac
aaggtctatcagcggcttatcgaaaaggtcgaactggacagcgtcaccagctatttcgca
atggaagcgattgccgaggggcggccgctgccactttag
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