Ruegeria pomeroyi: SPO3278
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Entry
SPO3278 CDS
T00215
Symbol
pyrF
Name
(GenBank) orotidine 5'-phosphate decarboxylase
KO
K01591
orotidine-5'-phosphate decarboxylase [EC:
4.1.1.23
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00240
Pyrimidine metabolism
sil01100
Metabolic pathways
sil01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SPO3278 (pyrF)
Enzymes [BR:
sil01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.23 orotidine-5'-phosphate decarboxylase
SPO3278 (pyrF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OMPdecase
PEP_mutase
Motif
Other DBs
NCBI-ProteinID:
AAV96507
UniProt:
Q5LND3
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All DBs
Position
3476654..3477376
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AA seq
240 aa
AA seq
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MLADDRLIVALDVPNAVAGLALAERLGDAVSFYKIGLGMLTGGGLALANELKQEHGKRIF
LDMKLFDIGNTVEAAVRGLSQFDLDFLTVHGDPHVVRAAKEGAAGKDLKILAVTILTSLN
RDDLDASLIKPGDVHDLVLERAARAFEAGADGVIASPQEAAAIRALPEAAGRLIVTPGIR
PAGADLGDQKRVATPANAIADGVDHIVVGRPVVHAPDPRAAALSILAEMTSPQAVAPNRS
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccgacgatcgcctgatcgtcgcccttgacgtgcccaatgcggtggccgggctg
gccctggccgaacggctgggcgacgcggtttccttttacaagatcgggctggggatgctc
accggtggcggtctcgctctggccaacgagctgaaacaggaacatggcaagcgcatcttc
ctggacatgaaactgttcgacatcggcaacacggtcgaggccgccgtgcggggcctgtcc
cagttcgatctggatttcctgaccgtgcatggcgacccgcatgtggtgcgcgccgccaag
gagggcgccgccggcaaggacctcaagatcctggccgtcaccattctgacctcgctgaac
cgcgacgatctggatgcgtcgctgatcaaacccggtgatgtgcacgaccttgttctggaa
cgtgccgcccgcgcctttgaggccggggccgatggtgtcatcgccagcccgcaggaggcg
gccgcgatccgcgccctacccgaggctgccgggcggctgatcgtgacccccggcatacgc
cccgcgggtgccgatctgggcgatcagaaacgcgtcgcgacaccggccaacgccattgcc
gacggggttgatcacatcgtggtggggcggcccgtcgtccacgctcccgaccctcgcgcc
gccgctctgtcgatccttgccgaaatgacctctccgcaagcagtggcaccaaaccggagt
tga
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