Ruegeria pomeroyi: SPO3328
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Entry
SPO3328 CDS
T00215
Symbol
gabD-2
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00250
Alanine, aspartate and glutamate metabolism
sil00310
Lysine degradation
sil00350
Tyrosine metabolism
sil00650
Butanoate metabolism
sil00760
Nicotinate and nicotinamide metabolism
sil01100
Metabolic pathways
sil01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SPO3328 (gabD-2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SPO3328 (gabD-2)
00310 Lysine degradation
SPO3328 (gabD-2)
00350 Tyrosine metabolism
SPO3328 (gabD-2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SPO3328 (gabD-2)
Enzymes [BR:
sil01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SPO3328 (gabD-2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SPO3328 (gabD-2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SPO3328 (gabD-2)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AAV96555
UniProt:
Q5LN84
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Position
3528637..3530148
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AA seq
503 aa
AA seq
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MGGPTNSRRRHAMLDAATDLKSLLKTPDLLATKAYIGGQWVDGDNGTFAVTNPARGDVIA
EVADLSRAQVAGAIAQAEAAQKEWAKYTGKERAVILRRWYDLMMEHAQDLGRILTAEQGK
PLAEAVGEVAYGASFIEFFAEEAKRIYGETIPGHQRDKRITVLKQPIGVAASITPWNFPN
AMITRKAGPALAAGCAFVARPAAETPLSALVLAVLAEKAGIPAGVFNVVPSSRSSEIGKE
FCENPGVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAML
CKFRNNGQTCVCANRIYVQAGVYDAFAEKLAAAVAKLNVGDGLSDGVTTGPLINAEAVEK
VLEHLGDVTAKGGAVLTGGKPHALGGTFFEPTVVTGVTQEMKVAKEETFGPLAPLFKFDD
VDEVIAMANDTIFGLAAYFYAKDLSRVYKVAEALEYGIVGVNTGIISTEVAPFGGIKQSG
LGREGSHHGIEDYLEMKYICMSV
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttgggtggacccacgaattctaggcggagacatgccatgctggatgcagcaaccgatctg
aaatcccttctcaagacacccgacctgttggcgaccaaggcctatatcggcggccaatgg
gttgacggcgacaacggcacctttgccgtcaccaaccccgcgcgcggcgacgtgatcgcc
gaggtcgcggacctaagccgagcccaggtggcgggcgccatcgcccaggccgaggcggcg
caaaaggaatgggccaagtataccggcaaggaacgcgccgtgatcctgcgtcgctggtac
gatctgatgatggaacacgcccaggacctgggccgcatcctgaccgccgagcagggcaag
cccctggccgaggcggtgggcgaagtggcctatggcgcctcgttcatcgagttctttgcc
gaagaggccaagcgcatctatggcgagaccattcccggccaccagcgcgacaagcgcatc
accgttctgaaacagccgatcggggtggccgcctcgatcacgccgtggaacttccccaac
gcgatgatcacccgcaaggctggcccggcgctggcggcgggctgtgcctttgtcgcgcgg
cctgctgcggaaaccccgctgtcggcgctggtgctggcggtgctggccgaaaaggccggc
atcccggcgggcgtgttcaacgtggtcccctcgtcgcgctccagcgagatcggcaaggaa
ttctgcgagaacccaggcgtgcgcaagctgaccttcactggctcgaccgaggtgggccgc
atcctgctgaaacaggccgccgaccaggtcatgaaatgctcgatggaactgggcggcaac
gcgcccttcatcgtgttcgacgatgccgatctggatgccgccgtcgaaggtgcgatgctg
tgcaaattccgcaacaacggccagacctgcgtctgcgccaaccggatctatgtacaggcg
ggcgtctatgatgcctttgccgaaaaactcgccgccgccgtggccaagctgaatgtaggc
gacgggctgagcgacggggtcaccaccgggccgctgatcaatgccgaagcggtcgaaaag
gtgctggaacacctgggcgatgtcaccgccaaaggcggcgcggtcctgaccggcggcaag
ccccatgcgctgggcggcaccttctttgaaccgaccgtggtgacaggcgtcacgcaagag
atgaaggttgccaaggaagaaacctttggcccgctggcgccgctgttcaagttcgatgac
gtggacgaggtgatcgccatggccaacgacacgatctttggccttgccgcctatttctat
gccaaggatctgagccgggtctacaaggtcgccgaagcgctggaatatggcatcgtcggc
gtcaataccggcatcatctcgaccgaggtcgcgccctttggcggcatcaagcaatctggc
ctgggccgcgagggcagccatcacgggatcgaggactatctggagatgaaatacatctgc
atgtcggtctga
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